Gm11797 Pseudogene Detail

Summary

• Symbol
  Gm11797
• Name
  predicted gene 11797

• Feature Type
  pseudogene
• IDs
  MGI:3651074
  NCBI Gene: 100416839
• Alliance
  gene page

Location &
Maps

• Sequence Map
  Chr4:6069901-6070627 bp, + strand

  From NCBI annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 4, 2.86 cM

Strain
Comparison

• SNPs within 2kb
  6 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_3651074	pseudogene	Chr4:6069874-6070627 (+)
129S1/SvImJ	MGP_129S1SvImJ_G0012494	pseudogene	Chr4:2599176-2599929 (+)
A/J	MGP_AJ_G0012488	pseudogene	Chr4:2610902-2611655 (+)
AKR/J	MGP_AKRJ_G0012452	pseudogene	Chr4:2591851-2592604 (+)
BALB/cJ	MGP_BALBcJ_G0012471	pseudogene	Chr4:2576094-2576847 (+)
C3H/HeJ	MGP_C3HHeJ_G0012333	pseudogene	Chr4:2718009-2718762 (+)
C57BL/6NJ	MGP_C57BL6NJ_G0012784	pseudogene	Chr4:2790224-2790977 (+)
CAROLI/EiJ	MGP_CAROLIEiJ_G0011141	pseudogene	Chr4:2338100-2338852 (+)
CAST/EiJ	MGP_CASTEiJ_G0012101	pseudogene	Chr4:2605414-2606167 (+)
CBA/J	MGP_CBAJ_G0012313	pseudogene	Chr4:2746265-2747018 (+)
DBA/2J	MGP_DBA2J_G0012367	pseudogene	Chr4:2563757-2564510 (+)
FVB/NJ	MGP_FVBNJ_G0012368	pseudogene	Chr4:2472713-2473466 (+)
LP/J	MGP_LPJ_G0012441	pseudogene	Chr4:2645963-2646716 (+)
NOD/ShiLtJ	MGP_NODShiLtJ_G0012376	pseudogene	Chr4:3015017-3015770 (+)
NZO/HlLtJ	MGP_NZOHlLtJ_G0012788	pseudogene	Chr4:2565521-2566274 (+)
PWK/PhJ	MGP_PWKPhJ_G0011935	pseudogene	Chr4:2595071-2595824 (+)
SPRET/EiJ	MGP_SPRETEiJ_G0011756	pseudogene	Chr4:2544335-2545090 (+)
WSB/EiJ	MGP_WSBEiJ_G0012126	pseudogene	Chr4:2695482-2696235 (+)

Homology

• Gene Tree
  Gm11797
  

Expression

• Assay Results
  706

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  22
• RefSeq
  1

• Ensembl
  ENSMUSG00000084360 (Evidence)
• NCBI Gene
  100416839

Representative Sequences			Length	Strain/Species
genomic	100416839	NCBI Gene Model | MGI Sequence Detail	727	C57BL/6J

References

• Summaries
  All 5
• Earliest
  J:23000 MGD Nomenclature Committee, Nomenclature Committee Use. 1995-02-14;
• Latest
  J:109762 Mouse Genome Informatics and VEGA Genome Database Project, Collaboration to Associate VEGA (Vertebrate Genome Annotation) Mouse Gene Models with MGI Markers. Database Release. 2006;