Gm11765 Pseudogene Detail

Summary

• Symbol
  Gm11765
• Name
  predicted gene 11765

• Feature Type
  pseudogene
• IDs
  MGI:3651002
  NCBI Gene: 100040131
• Alliance
  gene page

Location &
Maps

• Sequence Map
  Chr4:81374180-81379969 bp, - strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 4, 38.38 cM

Strain
Comparison

• SNPs within 2kb
  75 from dbSNP Build 142
• Strain Annotations
  15

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_3651002	pseudogene	Chr4:81374174-81403014 (-)
129S1/SvImJ	MGP_129S1SvImJ_G0012733	pseudogene	Chr4:81012218-81017983 (-)
A/J	MGP_AJ_G0012719	pseudogene	Chr4:78196043-78202084 (-)
AKR/J	MGP_AKRJ_G0012691	pseudogene	Chr4:80202552-80208207 (-)
BALB/cJ	MGP_BALBcJ_G0012701	pseudogene	Chr4:78450838-78457312 (-)
C3H/HeJ	no annotation
C57BL/6NJ	MGP_C57BL6NJ_G0013031	pseudogene	Chr4:84196289-84202078 (-)
CAROLI/EiJ	MGP_CAROLIEiJ_G0011322	pseudogene	Chr4:74251166-74256948 (-)
CAST/EiJ	MGP_CASTEiJ_G0012316	pseudogene	Chr4:78745882-78752823 (-)
CBA/J	MGP_CBAJ_G0012538	pseudogene	Chr4:86813897-86819518 (-)
DBA/2J	MGP_DBA2J_G0012598	pseudogene	Chr4:77967189-77972841 (-)
FVB/NJ	MGP_FVBNJ_G0012601	pseudogene	Chr4:76955796-76961687 (-)
LP/J	no annotation
NOD/ShiLtJ	MGP_NODShiLtJ_G0012610	pseudogene	Chr4:91888892-91895569 (-)
NZO/HlLtJ	MGP_NZOHlLtJ_G0013036	pseudogene	Chr4:80240107-80246006 (-)
PWK/PhJ	MGP_PWKPhJ_G0012138	pseudogene	Chr4:76346399-76352166 (-)
SPRET/EiJ	no annotation
WSB/EiJ	MGP_WSBEiJ_G0012340	pseudogene	Chr4:80442071-80448430 (-)

Homology

• Gene Tree
  Gm11765
  

Mutations,
Alleles, and
Phenotypes

• Phenotype Summary
  3 phenotype references
  

• All Mutations and Alleles
  3
• Chemically induced (other)
  2
• Radiation induced
  1
• Genomic Mutations
  3 involving Gm11765
• Find Mice (IMSR)
  0 strains or lines available

Expression

• Assay Results
  706

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  18

• Ensembl
  ENSMUSG00000081391 (Evidence)
• NCBI Gene
  100040131

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000081391	Ensembl Gene Model | MGI Sequence Detail	5790	C57BL/6J
transcript	ENSMUST00000121173	Ensembl | MGI Sequence Detail	1205	Not Applicable

References

• Summaries
  All 8

  Phenotypes 3
• Earliest
  J:23389 Roderick TH, Using inversions to detect and study recessive lethals and detrimentals in mice, in Utilization of Mammalian Specific Locus Studies in Hazard Evaluation and Estimation of Genetic Risk. 1983:135-67.
• Latest
  J:109762 Mouse Genome Informatics and VEGA Genome Database Project, Collaboration to Associate VEGA (Vertebrate Genome Annotation) Mouse Gene Models with MGI Markers. Database Release. 2006;