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Gm11588 Gene Detail
Summary
  • Symbol
    Gm11588
  • Name
    predicted gene 11588
  • Feature Type
    lncRNA gene
  • IDs
    MGI:3650951
  • Alliance
    gene page
Location &
Maps
more
  • Sequence Map
    Chr1:61479260-61508634 bp, + strand
    From Ensembl annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
    Ensembl | UCSC | NCBI
  • Genetic Map
    Chromosome 1, 30.67 cM
Strain
Comparison
more
  • SNPs within 2kb
    110 from dbSNP Build 142
  • Strain Annotations
    17
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_3650951
 lncRNA gene Chr1:61479260-61508634 (+)
129S1/SvImJ MGP_129S1SvImJ_G0004847
 lincRNA gene Chr1:61527550-61556438 (+)
A/J MGP_AJ_G0004828
 lincRNA gene Chr1:59354005-59385734 (+)
AKR/J MGP_AKRJ_G0004807
 lincRNA gene Chr1:61043946-61070111 (+)
BALB/cJ MGP_BALBcJ_G0004810
 lincRNA gene Chr1:59407179-59440435 (+)
C3H/HeJ MGP_C3HHeJ_G0004758
 lincRNA gene Chr1:61279517-61311653 (+)
C57BL/6NJ MGP_C57BL6NJ_G0004960
 lincRNA gene Chr1:63929056-63958172 (+)
CAROLI/EiJ no annotation
CAST/EiJ MGP_CASTEiJ_G0004712
 lincRNA gene Chr1:60503534-60528984 (+)
CBA/J MGP_CBAJ_G0004751
 lincRNA gene Chr1:65943066-65977178 (+)
DBA/2J MGP_DBA2J_G0004769
 lincRNA gene Chr1:58792262-58821092 (+)
FVB/NJ MGP_FVBNJ_G0004789
 lincRNA gene Chr1:58079537-58108554 (+)
LP/J MGP_LPJ_G0004848
 lincRNA gene Chr1:62412145-62438336 (+)
NOD/ShiLtJ MGP_NODShiLtJ_G0004773
 lincRNA gene Chr1:68860282-68890664 (+)
NZO/HlLtJ MGP_NZOHlLtJ_G0004964
 lincRNA gene Chr1:60966055-60996843 (+)
PWK/PhJ MGP_PWKPhJ_G0004665
 lincRNA gene Chr1:58143638-58169434 (+)
SPRET/EiJ MGP_SPRETEiJ_G0004591
 lincRNA gene Chr1:60500094-60530268 (+)
WSB/EiJ MGP_WSBEiJ_G0004756
 lincRNA gene Chr1:60674901-60700406 (+)



Homology
less
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    4 phenotype references
  • All Mutations and Alleles
    2
  • Chemically induced (other)
    1
  • Radiation induced
    1
  • Genomic Mutations
    2 involving Gm11588
  • Find Mice (IMSR)
    0 strains or lines available
Gene Ontology
(GO)
Classifications
less
Molecular Function

No experimental evidence to support Molecular Function annotation, following literature review. See J:73796.
Biological Process

No experimental evidence to support Biological Process annotation, following literature review. See J:73796.
Cellular Component

No experimental evidence to support Cellular Component annotation, following literature review. See J:73796.
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
    706
Sequences &
Gene Models
less
  • All Sequences
    19
Representative SequencesLengthStrain/SpeciesFlank
genomic ENSMUSG00000086408 Ensembl Gene Model | MGI Sequence Detail 29375 C57BL/6J ±  kb
transcript ENSMUST00000141758 Ensembl | MGI Sequence Detail 658 Not Applicable  
For the selected sequence
References
more
  • Summaries
    All 8
    Phenotypes 4
  • Earliest
    J:134667 Roderick TH, et al., Two radiation-induced chromosomal inversions in mice (Mus musculus). Proc Natl Acad Sci U S A. 1970 Oct;67(2):961-7
  • Latest
    J:7938 Juriloff DM, et al., Genetic and developmental studies of a new mouse mutation that produces otocephaly. J Craniofac Genet Dev Biol. 1985;5(2):121-45
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
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Send questions and comments to User Support. 		last database update
05/14/2024
MGI 6.23 		The Jackson Laboratory