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R3hdml Gene Detail
Summary
  • Symbol
    R3hdml
  • Name
    R3H domain containing-like
  • Synonyms
    OTTMUSG00000001070
  • Feature Type
    protein coding gene
  • IDs
    MGI:3650937
    NCBI Gene: 100043899
  • Gene Overview
    MyGene.info: R3HDML
  • Alliance
Location &
Maps
more
  • Sequence Map
    Chr2:163492318-163502612 bp, + strand
  • From Ensembl annotation of GRCm38

    View this region in JBrowse

  • Genome Browsers
  • Genetic Map
    Chromosome 2, 84.31 cM
Strain
Comparison
more
  • SNPs within 2kb
    89 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_3650937
protein coding gene Chr2:163491216-163504364 (.)
129S1/SvImJ MGP_129S1SvImJ_G0026824
protein coding gene Chr2:168840743-168852249 (+)
A/J MGP_AJ_G0026790
protein coding gene Chr2:162040965-162051194 (+)
AKR/J MGP_AKRJ_G0026761
protein coding gene Chr2:166831772-166842003 (+)
BALB/cJ MGP_BALBcJ_G0026799
protein coding gene Chr2:162364954-162375274 (+)
C3H/HeJ MGP_C3HHeJ_G0026541
protein coding gene Chr2:167182211-167192878 (+)
C57BL/6NJ MGP_C57BL6NJ_G0027247
protein coding gene Chr2:173772398-173782644 (+)
CAROLI/EiJ MGP_CAROLIEiJ_G0024617
protein coding gene Chr2:155336742-155347851 (+)
CAST/EiJ MGP_CASTEiJ_G0026002
protein coding gene Chr2:167567766-167582922 (+)
CBA/J MGP_CBAJ_G0026518
protein coding gene Chr2:180063724-180073996 (+)
DBA/2J MGP_DBA2J_G0026656
protein coding gene Chr2:161207931-161218187 (+)
FVB/NJ MGP_FVBNJ_G0026622
protein coding gene Chr2:159580891-159591707 (+)
LP/J MGP_LPJ_G0026759
protein coding gene Chr2:168974077-168984360 (+)
NOD/ShiLtJ MGP_NODShiLtJ_G0026644
protein coding gene Chr2:183707931-183718195 (+)
NZO/HlLtJ MGP_NZOHlLtJ_G0027303
protein coding gene Chr2:166712649-166724189 (+)
PWK/PhJ MGP_PWKPhJ_G0025736
protein coding gene Chr2:160765912-160776390 (+)
SPRET/EiJ MGP_SPRETEiJ_G0025539
protein coding gene Chr2:165586631-165598166 (+)
WSB/EiJ MGP_WSBEiJ_G0026072
protein coding gene Chr2:167572899-167584457 (+)



Homology
more
  • Human Ortholog
    R3HDML, R3H domain containing like
  • Vertebrate Orthologs
    9
  • Human Ortholog
    R3HDML, R3H domain containing like
    Orthology source: HomoloGene, HGNC
  • Synonyms
    dJ881L22.3
  • Links
    NCBI Gene ID: 140902
    neXtProt AC: NX_Q9H3Y0
    UniProt: Q9H3Y0

  • Chr Location
    20q13.12; chr20:44337158-44350792 (+)  GRCh38.p7

Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    4 phenotype references
Gene Ontology
(GO)
Classifications
less
  • All GO Annotations
  • GO References
Molecular Function

carbohydrate derivative binding
cytoskeletal protein binding
DNA binding
enzyme regulator
hydrolase
ligase
lipid binding
oxidoreductase
RNA binding
signaling receptor activity
signaling receptor binding
transcription
transferase
transporter
Biological Process

carbohydrate derivative metabolism
cell death
cell differentiation
cell proliferation
cellular component organization
establishment of localization
homeostatic process
immune system process
lipid metabolic process
nucleic acid-templated transcription
protein metabolic process
response to stimulus
signaling
system development
Cellular Component

cell projection
cytoplasmic vesicle
cytoskeleton
cytosol
endoplasmic reticulum
endosome
extracellular region
Golgi apparatus
mitochondrion
non-membrane-bounded organelle
nucleus
organelle envelope
organelle lumen
plasma membrane
synapse
vacuole
Click cells to view annotations.
Expression
less
  • cDNA Data
Interactions
less
Sequences &
Gene Models
less
Representative SequencesLengthStrain/SpeciesFlank
genomic ENSMUSG00000078949 Ensembl Gene Model | MGI Sequence Detail 10295 C57BL/6J ±  kb
transcript ENSMUST00000109416 Ensembl | MGI Sequence Detail 1094 Not Applicable  
polypeptide ENSMUSP00000105043 Ensembl | MGI Sequence Detail 253 Not Applicable  
For the selected sequence
Protein
Information
less
Molecular
Reagents
less
  • All nucleic 1
    cDNA 1

    Microarray probesets 1
References
more
  • Summaries
    All 18
    Gene Ontology 3
    Phenotypes 4
  • Earliest
    J:86696 Zambrowicz BP, et al., Wnk1 kinase deficiency lowers blood pressure in mice: a gene-trap screen to identify potential targets for therapeutic intervention. Proc Natl Acad Sci U S A. 2003 Nov 25;100(24):14109-14
  • Latest
    J:265628 Gaudet P, et al., Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. Brief Bioinform. 2011 Sep;12(5):449-62

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
Citing These Resources
Funding Information
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last database update
11/06/2018
MGI 6.13
The Jackson Laboratory