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Gm12666 Pseudogene Detail
Summary
  • Symbol
    Gm12666
  • Name
    predicted gene 12666
Location &
Maps
more
  • Sequence Map
    Chr4:92190740-92191336 bp, - strand
  • From NCBI annotation of GRCm38

    View this region in JBrowse

  • Genome Browsers
  • Genetic Map
    Chromosome 4, 43.16 cM
Strain
Comparison
more
  • SNPs within 2kb
    16 from dbSNP Build 142
  • Strain Annotations
    15
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_3650864
pseudogene Chr4:92190740-92191749 (-)
129S1/SvImJ MGP_129S1SvImJ_G0027861
protein coding gene Chr3:130035441-130036515 (-)
A/J MGP_AJ_G0028409
protein coding gene Chr4:88968721-88969876 (-)
AKR/J no annotation
BALB/cJ MGP_BALBcJ_G0027832
protein coding gene Chr3:125448605-125449509 (-)
C3H/HeJ MGP_C3HHeJ_G0028140
protein coding gene Chr4:91925111-91926028 (-)
C57BL/6NJ no annotation
CAROLI/EiJ MGP_CAROLIEiJ_G0025614
protein coding gene Chr3:120840464-120847120 (-)
CAST/EiJ MGP_CASTEiJ_G0027018
protein coding gene Chr3:128759884-128760854 (-)
CBA/J MGP_CBAJ_G0027537
protein coding gene Chr3:139288213-139291129 (-)
DBA/2J MGP_DBA2J_G0027678
protein coding gene Chr3:124808870-124816326 (-)
FVB/NJ no annotation
LP/J MGP_LPJ_G0020834
protein coding gene Chr13:114721823-114722529 (+)
NOD/ShiLtJ MGP_NODShiLtJ_G0027676
protein coding gene Chr3:147207925-147208839 (-)
NZO/HlLtJ MGP_NZOHlLtJ_G0028333
protein coding gene Chr3:128469819-128471496 (-)
PWK/PhJ MGP_PWKPhJ_G0027305
protein coding gene Chr4:86941157-86943393 (-)
SPRET/EiJ MGP_SPRETEiJ_G0026567
protein coding gene Chr3:126553422-126563588 (-)
WSB/EiJ MGP_WSBEiJ_G0027097
protein coding gene Chr3:129187757-129190213 (-)



Homology
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Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    3 phenotype references
  • All Mutations and Alleles
    3
  • Chemically induced (other)
    2
  • Radiation induced
    1
  • Genomic Mutations
    3 involving Gm12666
  • Find Mice (IMSR)
Expression
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Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
  • cDNA Data
Sequences &
Gene Models
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  • All Sequences
  • RefSeq
  • UniProt
Representative SequencesLengthStrain/SpeciesFlank
genomic 68280 NCBI Gene Model | MGI Sequence Detail 597 C57BL/6J ±  kb
transcript BB470802 GenBank | EMBL | DDBJ | MGI Sequence Detail 296 Not Specified  
polypeptide A2AMD0 UniProt | EBI | MGI Sequence Detail 254 Not Applicable  
For the selected sequence
Protein
Information
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  • UniProt
    1 Sequence
  • InterPro Domains
    IPR034887 LARP7, RNA recognition motif 1
    IPR012677 Nucleotide-binding alpha-beta plait domain superfamily
    IPR035979 RNA-binding domain superfamily
    IPR000504 RNA recognition motif domain
Molecular
Reagents
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  • All nucleic 1
    cDNA 1
References
more
  • Summaries
    All 11
    Phenotypes 3
  • Earliest
    J:23389 Roderick TH, Using inversions to detect and study recessive lethals and detrimentals in mice, in Utilization of Mammalian Specific Locus Studies in Hazard Evaluation and Estimation of Genetic Risk. 1983:135-67.
  • Latest
    J:109762 Mouse Genome Informatics and VEGA Genome Database Project, Collaboration to Associate VEGA (Vertebrate Genome Annotation) Mouse Gene Models with MGI Markers. Database Release. 2006;

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB), Gene Ontology (GO)
Citing These Resources
Funding Information
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last database update
06/30/2020
MGI 6.15
The Jackson Laboratory