Gm13372 Gene Detail

Summary

• Symbol
  Gm13372
• Name
  predicted gene 13372

• Feature Type
  lncRNA gene
• IDs
  MGI:3650806
  NCBI Gene: 115489445
• Alliance
  gene page

Location &
Maps

• Sequence Map
  Chr2:27915429-27920449 bp, - strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 2, 19.38 cM

Strain
Comparison

• SNPs within 2kb
  100 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_3650806	lncRNA gene	Chr2:27907747-27922604 (-)
129S1/SvImJ	MGP_129S1SvImJ_G0015406	unclassified non-coding RNA gene	Chr2:26035291-26040312 (-)
A/J	MGP_AJ_G0015381	unclassified non-coding RNA gene	Chr2:25073963-25078983 (-)
AKR/J	MGP_AKRJ_G0015345	unclassified non-coding RNA gene	Chr2:25904197-25909217 (-)
BALB/cJ	MGP_BALBcJ_G0015345	unclassified non-coding RNA gene	Chr2:25192369-25197389 (-)
C3H/HeJ	MGP_C3HHeJ_G0015169	unclassified non-coding RNA gene	Chr2:25812225-25817245 (-)
C57BL/6NJ	MGP_C57BL6NJ_G0015799	unclassified non-coding RNA gene	Chr2:26932996-26938016 (-)
CAROLI/EiJ	MGP_CAROLIEiJ_G0013540	unclassified non-coding RNA gene	Chr2:23875736-23880842 (-)
CAST/EiJ	MGP_CASTEiJ_G0014720	unclassified non-coding RNA gene	Chr2:25714112-25719141 (-)
CBA/J	MGP_CBAJ_G0015148	unclassified non-coding RNA gene	Chr2:27853234-27858254 (-)
DBA/2J	MGP_DBA2J_G0015243	unclassified non-coding RNA gene	Chr2:24885561-24890581 (-)
FVB/NJ	MGP_FVBNJ_G0015250	unclassified non-coding RNA gene	Chr2:24658493-24663513 (-)
LP/J	MGP_LPJ_G0015323	unclassified non-coding RNA gene	Chr2:25994769-26000228 (-)
NOD/ShiLtJ	MGP_NODShiLtJ_G0015276	unclassified non-coding RNA gene	Chr2:27859819-27864820 (-)
NZO/HlLtJ	MGP_NZOHlLtJ_G0015838	unclassified non-coding RNA gene	Chr2:25809088-25814108 (-)
PWK/PhJ	MGP_PWKPhJ_G0014509	unclassified non-coding RNA gene	Chr2:24678368-24683563 (-)
SPRET/EiJ	MGP_SPRETEiJ_G0014297	unclassified non-coding RNA gene	Chr2:25970303-25975291 (-)
WSB/EiJ	MGP_WSBEiJ_G0014827	unclassified non-coding RNA gene	Chr2:25945715-25950707 (-)

Homology

• Gene Tree
  Gm13372
  

Gene Ontology
(GO)
Classifications

Expression

• Assay Results
  706
• cDNA Data
  3

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  25
• RefSeq
  2
• UniProt
  1

• Ensembl
  ENSMUSG00000086560 (Evidence)
• NCBI Gene
  115489445

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000086560	Ensembl Gene Model | MGI Sequence Detail	5021	C57BL/6J
transcript	ENSMUST00000123129	Ensembl | MGI Sequence Detail	688	Not Applicable
polypeptide	Q3TYX9	UniProt | EBI | MGI Sequence Detail	147	Not Applicable

Protein
Information

• UniProt
  1 Sequence

Molecular
Reagents

• All nucleic 3

  cDNA 3

  
  

  Microarray probesets 1

References

• Summaries
  All 10
• Earliest
  J:23000 MGD Nomenclature Committee, Nomenclature Committee Use. 1995-02-14;
• Latest
  J:57747 MGI Genome Annotation Group and UniGene Staff, MGI-UniGene Interconnection Effort. Database Download. 2015;