Gm13413 Pseudogene Detail

Summary

• Symbol
  Gm13413
• Name
  predicted gene 13413

• Feature Type
  pseudogene
• IDs
  MGI:3650613
  NCBI Gene: 100504342
• Alliance
  gene page

Location &
Maps

• Sequence Map
  Chr2:32296067-32296668 bp, + strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 2, 22.09 cM

Strain
Comparison

• SNPs within 2kb
  24 from dbSNP Build 142
• Strain Annotations
  14

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_3650613	pseudogene	Chr2:32296052-32296716 (+)
129S1/SvImJ	MGP_129S1SvImJ_G0011580	pseudogene	Chr2:30863736-30866658 (+)
A/J	MGP_AJ_G0011578	pseudogene	Chr2:29552805-29554068 (+)
AKR/J	MGP_AKRJ_G0011543	pseudogene	Chr2:30607344-30613001 (+)
BALB/cJ	MGP_BALBcJ_G0011559	pseudogene	Chr2:29679427-29680084 (+)
C3H/HeJ	MGP_C3HHeJ_G0011443	pseudogene	Chr2:30502057-30502658 (+)
C57BL/6NJ	MGP_C57BL6NJ_G0011851	pseudogene	Chr2:31806812-31807370 (+)
CAROLI/EiJ	no annotation
CAST/EiJ	MGP_CASTEiJ_G0011243	pseudogene	Chr2:30437761-30438362 (+)
CBA/J	MGP_CBAJ_G0011416	pseudogene	Chr2:32998880-32999396 (+)
DBA/2J	MGP_DBA2J_G0011473	pseudogene	Chr2:29320280-29320881 (+)
FVB/NJ	no annotation
LP/J	MGP_LPJ_G0011538	pseudogene	Chr2:30739644-30740183 (+)
NOD/ShiLtJ	MGP_NODShiLtJ_G0011473	pseudogene	Chr2:32660599-32661135 (+)
NZO/HlLtJ	MGP_NZOHlLtJ_G0011841	pseudogene	Chr2:30490623-30494283 (+)
PWK/PhJ	no annotation
SPRET/EiJ	no annotation
WSB/EiJ	MGP_WSBEiJ_G0011266	pseudogene	Chr2:30663622-30664303 (+)

Homology

• Gene Tree
  Gm13413
  

Expression

• Assay Results
  706

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  17

• Ensembl
  ENSMUSG00000083004 (Evidence)
• NCBI Gene
  100504342

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000083004	Ensembl Gene Model | MGI Sequence Detail	602	C57BL/6J
transcript	ENSMUST00000120953	Ensembl | MGI Sequence Detail	602	Not Applicable

References

• Summaries
  All 5
• Earliest
  J:23000 MGD Nomenclature Committee, Nomenclature Committee Use. 1995-02-14;
• Latest
  J:109762 Mouse Genome Informatics and VEGA Genome Database Project, Collaboration to Associate VEGA (Vertebrate Genome Annotation) Mouse Gene Models with MGI Markers. Database Release. 2006;