Gm13752 Gene Detail

Summary

• Symbol
  Gm13752
• Name
  predicted gene 13752

• Feature Type
  lncRNA gene
• IDs
  MGI:3650596
  NCBI Gene: 100503167
• Alliance
  gene page

Location &
Maps

• Sequence Map
  Chr2:80225241-80230869 bp, + strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 2, 48.12 cM

Strain
Comparison

• SNPs within 2kb
  54 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_3650596	lncRNA gene	Chr2:80221708-80230869 (+)
129S1/SvImJ	MGP_129S1SvImJ_G0003598	antisense lncRNA gene	Chr2:80972492-80978120 (+)
A/J	MGP_AJ_G0003580	antisense lncRNA gene	Chr2:77852703-77858945 (+)
AKR/J	MGP_AKRJ_G0003558	antisense lncRNA gene	Chr2:79887125-79893701 (+)
BALB/cJ	MGP_BALBcJ_G0003569	antisense lncRNA gene	Chr2:77985497-77991708 (+)
C3H/HeJ	MGP_C3HHeJ_G0003516	antisense lncRNA gene	Chr2:80126129-80131977 (+)
C57BL/6NJ	MGP_C57BL6NJ_G0003707	antisense lncRNA gene	Chr2:83360100-83365728 (+)
CAROLI/EiJ	MGP_CAROLIEiJ_G0003216	antisense lncRNA gene	Chr2:75067462-75075240 (+)
CAST/EiJ	MGP_CASTEiJ_G0003479	antisense lncRNA gene	Chr2:80556833-80562464 (+)
CBA/J	MGP_CBAJ_G0003513	antisense lncRNA gene	Chr2:86364123-86372476 (+)
DBA/2J	MGP_DBA2J_G0003521	antisense lncRNA gene	Chr2:77401764-77407513 (+)
FVB/NJ	MGP_FVBNJ_G0003541	antisense lncRNA gene	Chr2:76749233-76754990 (+)
LP/J	MGP_LPJ_G0003594	antisense lncRNA gene	Chr2:80837274-80844448 (+)
NOD/ShiLtJ	MGP_NODShiLtJ_G0003529	antisense lncRNA gene	Chr2:88242939-88248574 (+)
NZO/HlLtJ	MGP_NZOHlLtJ_G0003709	antisense lncRNA gene	Chr2:80054815-80060443 (+)
PWK/PhJ	MGP_PWKPhJ_G0003434	antisense lncRNA gene	Chr2:77342394-77348412 (+)
SPRET/EiJ	MGP_SPRETEiJ_G0003378	antisense lncRNA gene	Chr2:80303116-80308792 (+)
WSB/EiJ	MGP_WSBEiJ_G0003513	antisense lncRNA gene	Chr2:80690418-80696053 (+)

Homology

• Gene Tree
  Gm13752
  

Mutations,
Alleles, and
Phenotypes

• Phenotype Summary
  7 phenotype references
  

• All Mutations and Alleles
  5
• Chemically induced (other)
  1
• Gene trapped
  2
• Targeted
  2
• Genomic Mutations
  3 involving Gm13752
• Find Mice (IMSR)
  0 strains or lines available

Gene Ontology
(GO)
Classifications

Expression

• Assay Results
  706
• cDNA Data
  4

Tissue x Stage Matrix

• Other Mouse Links
  GEO
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  25
• RefSeq
  1

• Ensembl
  ENSMUSG00000085921 (Evidence)
• NCBI Gene
  100503167

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000085921	Ensembl Gene Model | MGI Sequence Detail	5629	C57BL/6J
transcript	ENSMUST00000138195	Ensembl | MGI Sequence Detail	491	Not Applicable

Molecular
Reagents

• All nucleic 4

  cDNA 4

  
  

  Microarray probesets 1

References

• Summaries
  All 17

  Phenotypes 7
• Earliest
  J:86696 Zambrowicz BP, et al., Wnk1 kinase deficiency lowers blood pressure in mice: a gene-trap screen to identify potential targets for therapeutic intervention. Proc Natl Acad Sci U S A. 2003 Nov 25;100(24):14109-14
• Latest
  J:269738 Guerreiro I, et al., Reorganisation of Hoxd regulatory landscapes during the evolution of a snake-like body plan. Elife. 2016 Aug 1;5:e16087