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Cnbd1 Gene Detail
Summary
  • Symbol
    Cnbd1
  • Name
    cyclic nucleotide binding domain containing 1
  • Feature Type
    protein coding gene
  • IDs
    MGI:3650508
    NCBI Gene: 435772
  • Alliance
  • Transcription Start Sites
    3 TSS
Location &
Maps
more
  • Sequence Map
    Chr4:18860454-19122526 bp, - strand
    From Ensembl annotation of GRCm39
  • View this region in JBrowse

  • Genome Browsers
  • Genetic Map
    Chromosome 4, 7.28 cM
Strain
Comparison
more
  • SNPs within 2kb
    1254 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_3650508
protein coding gene Chr4:18767980-19122550 (-)
129S1/SvImJ MGP_129S1SvImJ_G0028078
protein coding gene Chr4:15860688-16147734 (-)
A/J MGP_AJ_G0028036
protein coding gene Chr4:15403247-15672082 (-)
AKR/J MGP_AKRJ_G0028001
protein coding gene Chr4:15720723-16016877 (-)
BALB/cJ MGP_BALBcJ_G0028047
protein coding gene Chr4:15368355-15636705 (-)
C3H/HeJ MGP_C3HHeJ_G0027777
protein coding gene Chr4:15845903-16127897 (-)
C57BL/6NJ MGP_C57BL6NJ_G0028490
protein coding gene Chr4:16509998-16789221 (-)
CAROLI/EiJ MGP_CAROLIEiJ_G0025832
protein coding gene Chr4:14287614-14539756 (-)
CAST/EiJ MGP_CASTEiJ_G0027232
protein coding gene Chr4:15649117-15928836 (-)
CBA/J MGP_CBAJ_G0027750
protein coding gene Chr4:16957358-17263850 (-)
DBA/2J MGP_DBA2J_G0027893
protein coding gene Chr4:15195942-15467557 (-)
FVB/NJ MGP_FVBNJ_G0027859
protein coding gene Chr4:14954969-15223060 (-)
LP/J MGP_LPJ_G0028002
protein coding gene Chr4:15886568-16188001 (-)
NOD/ShiLtJ MGP_NODShiLtJ_G0027892
protein coding gene Chr4:17892854-18218118 (-)
NZO/HlLtJ MGP_NZOHlLtJ_G0028549
protein coding gene Chr4:15627216-15912420 (-)
PWK/PhJ MGP_PWKPhJ_G0026952
protein coding gene Chr4:15141879-15404039 (-)
SPRET/EiJ MGP_SPRETEiJ_G0026781
protein coding gene Chr4:15505693-15786140 (-)
WSB/EiJ MGP_WSBEiJ_G0027309
protein coding gene Chr4:15723364-15992880 (-)



Homology
more
  • Human Ortholog
    CNBD1, cyclic nucleotide binding domain containing 1
  • Vertebrate Orthologs
    2
Vertebrate Orthology Source
Alliance of Genome Resources
  • Human Ortholog
    CNBD1, cyclic nucleotide binding domain containing 1
  • Links
    NCBI Gene ID: 168975
    neXtProt AC: NX_Q8NA66
    UniProt: Q8NA66

  • Chr Location
    8q21.3; chr8:86866442-87428652 (+)  GRCh38.p7

Mutations,
Alleles, and
Phenotypes
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  • Phenotype Summary
    1 phenotype from 1 allele in 1 genetic background
    6 phenotype references
Phenotype Overview

adipose tissue
behavior/neurological
cardiovascular system
cellular
craniofacial
digestive/alimentary system
embryo
endocrine/exocrine glands
growth/size/body
hearing/vestibular/ear
hematopoietic system
homeostasis/metabolism
immune system
integument
limbs/digits/tail
liver/biliary system
mortality/aging
muscle
neoplasm
nervous system
pigmentation
renal/urinary system
reproductive system
respiratory system
skeleton
taste/olfaction
vision/eye

Click cells to view annotations.
Expression
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Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
Sequences &
Gene Models
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  • All Sequences
  • RefSeq
  • UniProt
Representative SequencesLengthStrain/SpeciesFlank
genomic ENSMUSG00000073991 Ensembl Gene Model | MGI Sequence Detail 262073 C57BL/6J ±  kb
transcript ENSMUST00000137780 Ensembl | MGI Sequence Detail 1331 Not Applicable  
polypeptide ENSMUSP00000121576 Ensembl | MGI Sequence Detail 430 Not Applicable  
For the selected sequence
Protein
Information
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  • UniProt
    1 Sequence
  • InterPro Domains
    IPR000595 Cyclic nucleotide-binding domain
    IPR043533 Cyclic nucleotide-binding domain-containing protein 1/2
    IPR018490 Cyclic nucleotide-binding-like
    IPR014710 RmlC-like jelly roll fold
References
more
  • Summaries
    All 13
    Phenotypes 6
  • Earliest
    J:173534 Skarnes WC, et al., A conditional knockout resource for the genome-wide study of mouse gene function. Nature. 2011 Jun 16;474(7351):337-42
  • Latest
    J:236599 Dickinson ME, et al., High-throughput discovery of novel developmental phenotypes. Nature. 2016 Sep 14;537(7621):508-514

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB), Gene Ontology (GO)
Citing These Resources
Funding Information
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last database update
10/12/2021
MGI 6.17
The Jackson Laboratory