Gm13583 Gene Detail

Summary

• Symbol
  Gm13583
• Name
  predicted gene 13583

• Feature Type
  lncRNA gene
• IDs
  MGI:3650462
  NCBI Gene: 101055782
• Alliance
  gene page

Location &
Maps

• Sequence Map
  Chr2:60381255-60383360 bp, + strand

  From NCBI annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 2, 34.77 cM

Strain
Comparison

• SNPs within 2kb
  9 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_3650462	lncRNA gene	Chr2:60381101-60384267 (+)
129S1/SvImJ	MGP_129S1SvImJ_G0003567	antisense lncRNA gene	Chr2:60153404-60156565 (+)
A/J	MGP_AJ_G0003547	antisense lncRNA gene	Chr2:57833469-57836635 (+)
AKR/J	MGP_AKRJ_G0003526	antisense lncRNA gene	Chr2:59427488-59430654 (+)
BALB/cJ	MGP_BALBcJ_G0003536	antisense lncRNA gene	Chr2:57948175-57951341 (+)
C3H/HeJ	MGP_C3HHeJ_G0003484	antisense lncRNA gene	Chr2:59524850-59528016 (+)
C57BL/6NJ	MGP_C57BL6NJ_G0003674	antisense lncRNA gene	Chr2:61917078-61920243 (+)
CAROLI/EiJ	MGP_CAROLIEiJ_G0003184	antisense lncRNA gene	Chr2:55408308-55411442 (+)
CAST/EiJ	MGP_CASTEiJ_G0003447	antisense lncRNA gene	Chr2:59574324-59577486 (+)
CBA/J	MGP_CBAJ_G0003481	antisense lncRNA gene	Chr2:64271264-64274425 (+)
DBA/2J	MGP_DBA2J_G0003489	antisense lncRNA gene	Chr2:57430018-57433183 (+)
FVB/NJ	MGP_FVBNJ_G0003508	antisense lncRNA gene	Chr2:56973652-56976819 (+)
LP/J	MGP_LPJ_G0003562	antisense lncRNA gene	Chr2:59996478-59999639 (+)
NOD/ShiLtJ	MGP_NODShiLtJ_G0003496	antisense lncRNA gene	Chr2:65876397-65879554 (+)
NZO/HlLtJ	MGP_NZOHlLtJ_G0003677	antisense lncRNA gene	Chr2:59456475-59459634 (+)
PWK/PhJ	MGP_PWKPhJ_G0003402	antisense lncRNA gene	Chr2:57292616-57295774 (+)
SPRET/EiJ	MGP_SPRETEiJ_G0003347	antisense lncRNA gene	Chr2:59528915-59532068 (+)
WSB/EiJ	MGP_WSBEiJ_G0003482	antisense lncRNA gene	Chr2:59743502-59746665 (+)

Homology

• Gene Tree
  Gm13583
  

Mutations,
Alleles, and
Phenotypes

• Phenotype Summary
  2 phenotype references
  

• All Mutations and Alleles
  1
• Chemically induced (other)
  1
• Genomic Mutations
  1 involving Gm13583
• Find Mice (IMSR)
  0 strains or lines available

Gene Ontology
(GO)
Classifications

Expression

• Assay Results
  706
• cDNA Data
  1

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  26
• RefSeq
  1
• UniProt
  1

• Ensembl
  ENSMUSG00000086578 (Evidence)
• NCBI Gene
  101055782

Representative Sequences			Length	Strain/Species
genomic	101055782	NCBI Gene Model | MGI Sequence Detail	2106	C57BL/6J
transcript	BC023004	GenBank | ENA | DDBJ | MGI Sequence Detail	1486	C57BL/6
polypeptide	Q8R1W4	UniProt | EBI | MGI Sequence Detail	40	Not Applicable

Protein
Information

• UniProt
  1 Sequence

Molecular
Reagents

• All nucleic 1

  cDNA 1

  
  

  Microarray probesets 1

References

• Summaries
  All 12

  Phenotypes 2
• Earliest
  J:23389 Roderick TH, Using inversions to detect and study recessive lethals and detrimentals in mice, in Utilization of Mammalian Specific Locus Studies in Hazard Evaluation and Estimation of Genetic Risk. 1983:135-67.
• Latest
  J:144087 Mouse Genome Informatics Scientific Curators, Mouse Microarray Data Integration in Mouse Genome Informatics, the Affymetrix GeneChip Mouse Genome 430 2.0 Array Platform. Database Download. 2009;