Gm11799 Pseudogene Detail

Summary

• Symbol
  Gm11799
• Name
  predicted gene 11799

• Feature Type
  pseudogene
• IDs
  MGI:3650446
  NCBI Gene: 100039494
• Alliance
  gene page

Location &
Maps

• Sequence Map
  Chr4:8166894-8167353 bp, - strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 4, 3.53 cM

Strain
Comparison

• SNPs within 2kb
  43 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_3650446	pseudogene	Chr4:8166894-8167353 (-)
129S1/SvImJ	MGP_129S1SvImJ_G0012499	pseudogene	Chr4:4735980-4736439 (-)
A/J	MGP_AJ_G0012493	pseudogene	Chr4:4683206-4683665 (-)
AKR/J	MGP_AKRJ_G0012457	pseudogene	Chr4:4704126-4704585 (-)
BALB/cJ	MGP_BALBcJ_G0012476	pseudogene	Chr4:4656938-4657397 (-)
C3H/HeJ	MGP_C3HHeJ_G0012338	pseudogene	Chr4:4848152-4848611 (-)
C57BL/6NJ	MGP_C57BL6NJ_G0012789	pseudogene	Chr4:5025961-5026420 (-)
CAROLI/EiJ	MGP_CAROLIEiJ_G0011147	pseudogene	Chr4:4292759-4293204 (-)
CAST/EiJ	MGP_CASTEiJ_G0012107	pseudogene	Chr4:4721016-4721471 (-)
CBA/J	MGP_CBAJ_G0012318	pseudogene	Chr4:5084679-5085138 (-)
DBA/2J	MGP_DBA2J_G0012372	pseudogene	Chr4:4636163-4636622 (-)
FVB/NJ	MGP_FVBNJ_G0012373	pseudogene	Chr4:4499482-4499941 (-)
LP/J	MGP_LPJ_G0012446	pseudogene	Chr4:4769688-4770147 (-)
NOD/ShiLtJ	MGP_NODShiLtJ_G0012381	pseudogene	Chr4:5366562-5367021 (-)
NZO/HlLtJ	MGP_NZOHlLtJ_G0012793	pseudogene	Chr4:4669091-4669550 (-)
PWK/PhJ	MGP_PWKPhJ_G0011941	pseudogene	Chr4:4640545-4641000 (-)
SPRET/EiJ	MGP_SPRETEiJ_G0011762	pseudogene	Chr4:4653475-4653930 (-)
WSB/EiJ	MGP_WSBEiJ_G0012131	pseudogene	Chr4:4796484-4796943 (-)

Homology

• Gene Tree
  Gm11799
  

Expression

• Assay Results
  706

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  20

• Ensembl
  ENSMUSG00000079993 (Evidence)
• NCBI Gene
  100039494

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000079993	Ensembl Gene Model | MGI Sequence Detail	460	C57BL/6J
transcript	ENSMUST00000116110	Ensembl | MGI Sequence Detail	460	Not Applicable

Molecular
Reagents

• 
  

  Microarray probesets 1

References

• Summaries
  All 5
• Earliest
  J:23000 MGD Nomenclature Committee, Nomenclature Committee Use. 1995-02-14;
• Latest
  J:144086 Mouse Genome Informatics Scientific Curators, Mouse Microarray Data Integration in Mouse Genome Informatics, the Affymetrix GeneChip Mouse Gene 1.0 ST Array Platform. Database Download. 2009;