Gm12689 Gene Detail

Summary

• Symbol
  Gm12689
• Name
  predicted gene 12689

• Feature Type
  protein coding gene
  BioType Conflict
  
• IDs
  MGI:3650433
  NCBI Gene: 100137011
• Alliance
  genome feature page

Location &
Maps

• Sequence Map
  Chr4:99184137-99185495 bp, + strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 4, 45.64 cM

Strain
Comparison

• SNPs within 2kb
  135 from dbSNP Build 142
• Strain Annotations
  3

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_3650433	protein coding gene	Chr4:99184137-99185495 (+)
129S1/SvImJ	no annotation
A/J	no annotation
AKR/J	no annotation
BALB/cJ	no annotation
C3H/HeJ	no annotation
C57BL/6NJ	ENSMUSG00215012523	protein coding gene	Chr4:94557831-94559189 (+)
CAROLI/EiJ	MGP_CAROLIEiJ_G0026192	protein coding gene	Chr4:91446049-91447383 (+)
CAST/EiJ	no annotation
CBA/J	no annotation
DBA/2J	no annotation
FVB/NJ	no annotation
JF1/MsJ	no annotation
LP/J	no annotation
NOD/ShiLtJ	no annotation
NZO/HlLtJ	no annotation
PWK/PhJ	no annotation
SPRET/EiJ	no annotation
WSB/EiJ	no annotation

Homology

• Gene Tree
  Gm12689
  

Mutations,
Alleles, and
Phenotypes

• Phenotype Summary
  6 phenotype references
  

• All Mutations and Alleles
  4
• Chemically induced (other)
  2
• Radiation induced
  1
• Targeted
  1
• Genomic Mutations
  4 involving Gm12689
• Incidental Mutations
  Mutagenetix , APF
• Find Mice (IMSR)
  6 strains or lines available

Expression

• Assay Results
  597
• cDNA Data
  1

Tissue x Stage Matrix

• Other Mouse Links
  GEO
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  8
• UniProt
  1

• Ensembl
  ENSMUSG00000070891 (Evidence)
• NCBI Gene
  100137011

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000070891	Ensembl Gene Model | MGI Sequence Detail	1359	C57BL/6J
transcript	ENSMUST00000094955	Ensembl | MGI Sequence Detail	1359	Not Applicable
polypeptide	Q8BQU9	UniProt | EBI | MGI Sequence Detail	117	Not Applicable

Protein
Information

• UniProt
  1 Sequence

Molecular
Reagents

• All nucleic 1

  cDNA 1

  
  

  Microarray probesets 2

References

• Summaries
  All 16

  Phenotypes 6
• Earliest
  J:84714 Nishijima I, et al., Two new balancer chromosomes on mouse chromosome 4 to facilitate functional annotation of human chromosome 1p. Genesis. 2003 Jul;36(3):142-8
• Latest
  J:148802 Boles MK, et al., A mouse chromosome 4 balancer ENU-mutagenesis screen isolates eleven lethal lines. BMC Genet. 2009;10:12