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Gm12500 Gene Detail
Summary
  • Symbol
    Gm12500
  • Name
    predicted gene 12500
Location &
Maps
more
  • Sequence Map
    Chr3:108085976-108088011 bp, + strand
  • From NCBI annotation of GRCm38

    View this region in JBrowse

  • Genome Browsers
  • Genetic Map
    Chromosome 3, 46.83 cM
Strain
Comparison
more
  • SNPs within 2kb
    14 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_3650304
lncRNA gene Chr3:108085584-108088011 (+)
129S1/SvImJ MGP_129S1SvImJ_G0003814
antisense lncRNA gene Chr3:109618182-109620609 (+)
A/J MGP_AJ_G0003794
antisense lncRNA gene Chr3:106143181-106145608 (+)
AKR/J MGP_AKRJ_G0003770
antisense lncRNA gene Chr3:108729980-108732407 (+)
BALB/cJ MGP_BALBcJ_G0003781
antisense lncRNA gene Chr3:105846669-105849096 (+)
C3H/HeJ MGP_C3HHeJ_G0003728
antisense lncRNA gene Chr3:109070697-109073124 (+)
C57BL/6NJ MGP_C57BL6NJ_G0003923
antisense lncRNA gene Chr3:113711688-113714115 (+)
CAROLI/EiJ MGP_CAROLIEiJ_G0003426
antisense lncRNA gene Chr3:102296260-102298687 (+)
CAST/EiJ MGP_CASTEiJ_G0003692
antisense lncRNA gene Chr3:108450407-108452835 (+)
CBA/J MGP_CBAJ_G0003722
antisense lncRNA gene Chr3:117578804-117581231 (+)
DBA/2J MGP_DBA2J_G0003734
antisense lncRNA gene Chr3:105326513-105328940 (+)
FVB/NJ MGP_FVBNJ_G0003755
antisense lncRNA gene Chr3:103213298-103215725 (+)
LP/J MGP_LPJ_G0003816
antisense lncRNA gene Chr3:111037212-111039639 (+)
NOD/ShiLtJ MGP_NODShiLtJ_G0003742
antisense lncRNA gene Chr3:123650260-123652687 (+)
NZO/HlLtJ MGP_NZOHlLtJ_G0003924
antisense lncRNA gene Chr3:108322945-108325379 (+)
PWK/PhJ MGP_PWKPhJ_G0003648
antisense lncRNA gene Chr3:105074869-105077410 (+)
SPRET/EiJ MGP_SPRETEiJ_G0003592
antisense lncRNA gene Chr3:106458037-106460460 (+)
WSB/EiJ MGP_WSBEiJ_G0003728
antisense lncRNA gene Chr3:108853205-108855632 (+)



Homology
less
Human Diseases
less
  • References
    1 with disease annotations
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    5 phenotype references
Expression
less
  • cDNA Data
Interactions
less
Sequences &
Gene Models
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  • All Sequences
  • RefSeq
  • UniProt
  • UniGene
Representative SequencesLengthStrain/SpeciesFlank
genomic 791415 NCBI Gene Model | MGI Sequence Detail 2036 C57BL/6J ±  kb
transcript NM_001358018 RefSeq | MGI Sequence Detail 2065 C57BL/6  
polypeptide NP_001344947 RefSeq | MGI Sequence Detail 205 C57BL/6  
For the selected sequence
Protein
Information
less
  • UniProt
    1 Sequence
Molecular
Reagents
less
  • All nucleic 1
    cDNA 1

    Microarray probesets 2
References
more
  • Summaries
    All 17
    Diseases 1
    Phenotypes 5
  • Earliest
    J:70677 Cook SA, et al., Mouse paracentric inversion In(3)55Rk mutates the urate oxidase gene. Cytogenet Cell Genet. 2001;93(1-2):77-82
  • Latest
    J:142754 Hansen GM, et al., Large-scale gene trapping in C57BL/6N mouse embryonic stem cells. Genome Res. 2008 Oct;18(10):1670-9

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB), Gene Ontology (GO)
Citing These Resources
Funding Information
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last database update
12/03/2019
MGI 6.14
The Jackson Laboratory