About   Help   FAQ
Gm12500 Gene Detail
Summary
  • Symbol
    Gm12500
  • Name
    predicted gene 12500
Location &
Maps
more
  • Sequence Map
    Chr3:108085976-108088011 bp, + strand
  • From NCBI annotation of GRCm38

    View this region in JBrowse

  • Genome Browsers
  • Genetic Map
    Chromosome 3, 46.83 cM
Strain
Comparison
more
  • SNPs within 2kb
    14 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_3650304
protein coding gene Chr3:108085584-108088011 (+)
129S1/SvImJ MGP_129S1SvImJ_G0003814
antisense lncRNA gene Chr3:109618182-109620609 (+)
A/J MGP_AJ_G0003794
antisense lncRNA gene Chr3:106143181-106145608 (+)
AKR/J MGP_AKRJ_G0003770
antisense lncRNA gene Chr3:108729980-108732407 (+)
BALB/cJ MGP_BALBcJ_G0003781
antisense lncRNA gene Chr3:105846669-105849096 (+)
C3H/HeJ MGP_C3HHeJ_G0003728
antisense lncRNA gene Chr3:109070697-109073124 (+)
C57BL/6NJ MGP_C57BL6NJ_G0003923
antisense lncRNA gene Chr3:113711688-113714115 (+)
CAROLI/EiJ MGP_CAROLIEiJ_G0003426
antisense lncRNA gene Chr3:102296260-102298687 (+)
CAST/EiJ MGP_CASTEiJ_G0003692
antisense lncRNA gene Chr3:108450407-108452835 (+)
CBA/J MGP_CBAJ_G0003722
antisense lncRNA gene Chr3:117578804-117581231 (+)
DBA/2J MGP_DBA2J_G0003734
antisense lncRNA gene Chr3:105326513-105328940 (+)
FVB/NJ MGP_FVBNJ_G0003755
antisense lncRNA gene Chr3:103213298-103215725 (+)
LP/J MGP_LPJ_G0003816
antisense lncRNA gene Chr3:111037212-111039639 (+)
NOD/ShiLtJ MGP_NODShiLtJ_G0003742
antisense lncRNA gene Chr3:123650260-123652687 (+)
NZO/HlLtJ MGP_NZOHlLtJ_G0003924
antisense lncRNA gene Chr3:108322945-108325379 (+)
PWK/PhJ MGP_PWKPhJ_G0003648
antisense lncRNA gene Chr3:105074869-105077410 (+)
SPRET/EiJ MGP_SPRETEiJ_G0003592
antisense lncRNA gene Chr3:106458037-106460460 (+)
WSB/EiJ MGP_WSBEiJ_G0003728
antisense lncRNA gene Chr3:108853205-108855632 (+)



Homology
less
Human Diseases
less
  • References
    1 with disease annotations
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    5 phenotype references
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
  • cDNA Data
Interactions
less
Sequences &
Gene Models
less
  • All Sequences
  • RefSeq
  • UniProt
  • UniGene
Representative SequencesLengthStrain/SpeciesFlank
genomic 791415 NCBI Gene Model | MGI Sequence Detail 2036 C57BL/6J ±  kb
transcript NM_001358018 RefSeq | MGI Sequence Detail 2065 C57BL/6  
polypeptide NP_001344947 RefSeq | MGI Sequence Detail 205 C57BL/6  
For the selected sequence
Protein
Information
less
  • UniProt
    1 Sequence
Molecular
Reagents
less
  • All nucleic 1
    cDNA 1

    Microarray probesets 2
References
more
  • Summaries
    All 17
    Diseases 1
    Phenotypes 5
  • Earliest
    J:70677 Cook SA, et al., Mouse paracentric inversion In(3)55Rk mutates the urate oxidase gene. Cytogenet Cell Genet. 2001;93(1-2):77-82
  • Latest
    J:142754 Hansen GM, et al., Large-scale gene trapping in C57BL/6N mouse embryonic stem cells. Genome Res. 2008 Oct;18(10):1670-9

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB), Gene Ontology (GO)
Citing These Resources
Funding Information
Warranty Disclaimer & Copyright Notice
Send questions and comments to User Support.
last database update
11/10/2020
MGI 6.16
The Jackson Laboratory