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Pramel21 Gene Detail
Summary
  • Symbol
    Pramel21
  • Name
    PRAME like 21
  • Synonyms
    Gm13083
  • Feature Type
    protein coding gene
  • IDs
    MGI:3650232
    NCBI Gene: 279185
  • Alliance
Location &
Maps
more
  • Sequence Map
    Chr4:143615003-143618595 bp, + strand
  • From Ensembl annotation of GRCm38

    View this region in JBrowse

  • Genome Browsers
  • Genetic Map
    Chromosome 4, 77.81 cM
Strain
Comparison
more
  • SNPs within 2kb
    110 from dbSNP Build 142
  • Strain Annotations
    9
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_3650232
protein coding gene Chr4:143615003-143618738 (+)
129S1/SvImJ MGP_129S1SvImJ_G0029079
protein coding gene Chr4:147192283-147199867 (-)
A/J no annotation
AKR/J no annotation
BALB/cJ no annotation
C3H/HeJ MGP_C3HHeJ_G0028777
protein coding gene Chr4:145010972-145014074 (+)
C57BL/6NJ no annotation
CAROLI/EiJ no annotation
CAST/EiJ no annotation
CBA/J MGP_CBAJ_G0028736
protein coding gene Chr4:156571312-156574414 (+)
DBA/2J no annotation
FVB/NJ MGP_FVBNJ_G0028290
protein coding gene Chr4:99922174-99929278 (-)
LP/J MGP_LPJ_G0028984
protein coding gene Chr4:146996216-146998501 (+)
NOD/ShiLtJ MGP_NODShiLtJ_G0028876
protein coding gene Chr4:160004426-160128907 (+)
NZO/HlLtJ MGP_NZOHlLtJ_G0029536
protein coding gene Chr4:145065629-145070092 (+)
PWK/PhJ no annotation
SPRET/EiJ MGP_SPRETEiJ_G0027755
protein coding gene Chr4:140812797-140816026 (+)
WSB/EiJ no annotation



Homology
less
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    3 phenotype references
Gene Ontology
(GO)
Classifications
less
  • All GO Annotations
  • GO References
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
Interactions
less
Sequences &
Gene Models
less
Representative SequencesLengthStrain/SpeciesFlank
genomic ENSMUSG00000066688 Ensembl Gene Model | MGI Sequence Detail 3593 C57BL/6J ±  kb
transcript ENSMUST00000105773 Ensembl | MGI Sequence Detail 2464 Not Applicable  
polypeptide ENSMUSP00000101399 Ensembl | MGI Sequence Detail 501 Not Applicable  
For the selected sequence
Protein
Information
less
  • UniProt
    1 Sequence
  • InterPro Domains
    IPR032675 Leucine-rich repeat domain superfamily
    IPR026271 PRAME family
References
more
  • Summaries
    All 12
    Gene Ontology 1
    Phenotypes 3
  • Earliest
    J:84714 Nishijima I, et al., Two new balancer chromosomes on mouse chromosome 4 to facilitate functional annotation of human chromosome 1p. Genesis. 2003 Jul;36(3):142-8
  • Latest
    J:265628 Gaudet P, et al., Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. Brief Bioinform. 2011 Sep;12(5):449-62

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB), Gene Ontology (GO)
Citing These Resources
Funding Information
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last database update
11/10/2020
MGI 6.16
The Jackson Laboratory