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Gm12695 Gene Detail
Summary
  • Symbol
    Gm12695
  • Name
    predicted gene 12695
  • Feature Type
    protein coding gene
  • IDs
    MGI:3650206
    NCBI Gene: 620779
  • Alliance
Location &
Maps
more
  • Sequence Map
    Chr4:96723647-96785186 bp, - strand
  • From Ensembl annotation of GRCm38

    View this region in JBrowse

  • Genome Browsers
  • Genetic Map
    Chromosome 4, 44.79 cM
Strain
Comparison
more
  • SNPs within 2kb
    289 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_3650206
protein coding gene Chr4:96723581-96786830 (-)
129S1/SvImJ MGP_129S1SvImJ_G0028467
protein coding gene Chr4:96822179-96890455 (-)
A/J MGP_AJ_G0028430
protein coding gene Chr4:93421195-93484813 (-)
AKR/J MGP_AKRJ_G0028377
protein coding gene Chr4:95715276-95779371 (-)
BALB/cJ MGP_BALBcJ_G0028448
protein coding gene Chr4:93697658-93759082 (-)
C3H/HeJ MGP_C3HHeJ_G0028161
protein coding gene Chr4:96518164-96585173 (-)
C57BL/6NJ MGP_C57BL6NJ_G0028887
protein coding gene Chr4:100521399-100589959 (-)
CAROLI/EiJ MGP_CAROLIEiJ_G0026179
protein coding gene Chr4:88914619-88972478 (-)
CAST/EiJ MGP_CASTEiJ_G0027601
protein coding gene Chr4:94301011-94364278 (-)
CBA/J MGP_CBAJ_G0028130
protein coding gene Chr4:103566582-103630750 (-)
DBA/2J MGP_DBA2J_G0028280
protein coding gene Chr4:93221338-93282472 (-)
FVB/NJ MGP_FVBNJ_G0028247
protein coding gene Chr4:92076067-92137629 (-)
LP/J MGP_LPJ_G0028380
protein coding gene Chr4:97149758-97210536 (-)
NOD/ShiLtJ MGP_NODShiLtJ_G0028275
protein coding gene Chr4:109352884-109423586 (-)
NZO/HlLtJ MGP_NZOHlLtJ_G0028925
protein coding gene Chr4:95955561-96019021 (-)
PWK/PhJ MGP_PWKPhJ_G0027326
protein coding gene Chr4:91342081-91403450 (-)
SPRET/EiJ MGP_SPRETEiJ_G0027147
protein coding gene Chr4:93403882-93482087 (-)
WSB/EiJ MGP_WSBEiJ_G0027679
protein coding gene Chr4:96070727-96134823 (-)



Homology
more
  • Human Ortholog
    C1orf87, chromosome 1 open reading frame 87
  • Vertebrate Orthologs
    7
  • Human Ortholog
    C1orf87, chromosome 1 open reading frame 87
    Orthology source: HomoloGene, HGNC
  • Synonyms
    CREF
  • Links
    NCBI Gene ID: 127795
    neXtProt AC: NX_Q8N0U7
    UniProt: Q8N0U7

  • Chr Location
    1p32.1; chr1:59990394-60073770 (-)  GRCh38.p7

Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    1 phenotype from 1 allele in 1 genetic background
    10 phenotype references
Phenotype Overview

adipose tissue
behavior/neurological
cardiovascular system
cellular
craniofacial
digestive/alimentary system
embryo
endocrine/exocrine glands
growth/size/body
hearing/vestibular/ear
hematopoietic system
homeostasis/metabolism
immune system
integument
limbs/digits/tail
liver/biliary system
mortality/aging
muscle
neoplasm
nervous system
pigmentation
renal/urinary system
reproductive system
respiratory system
skeleton
taste/olfaction
vision/eye

Click cells to view annotations.
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
Interactions
less
Sequences &
Gene Models
less
Representative SequencesLengthStrain/SpeciesFlank
genomic ENSMUSG00000078639 Ensembl Gene Model | MGI Sequence Detail 61540 C57BL/6J ±  kb
transcript ENSMUST00000107071 Ensembl | MGI Sequence Detail 1904 Not Applicable  
polypeptide ENSMUSP00000102686 Ensembl | MGI Sequence Detail 545 Not Applicable  
For the selected sequence
Protein
Information
less
  • UniProt
    1 Sequence
  • InterPro Domains
    IPR011992 EF-hand domain pair
    IPR040774 Protein of unknown function DUF5580
Molecular
Reagents
less

  • Microarray probesets 1
References
more
  • Summaries
    All 19
    Phenotypes 10
  • Earliest
    J:84714 Nishijima I, et al., Two new balancer chromosomes on mouse chromosome 4 to facilitate functional annotation of human chromosome 1p. Genesis. 2003 Jul;36(3):142-8
  • Latest
    J:173534 Skarnes WC, et al., A conditional knockout resource for the genome-wide study of mouse gene function. Nature. 2011 Jun 16;474(7351):337-42

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB), Gene Ontology (GO)
Citing These Resources
Funding Information
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last database update
11/10/2020
MGI 6.16
The Jackson Laboratory