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Pramel27 Gene Detail
Summary
  • Symbol
    Pramel27
  • Name
    PRAME like 27
  • Synonyms
    Gm13103
  • Feature Type
    protein coding gene
  • IDs
    MGI:3650203
    NCBI Gene: 194225
  • Alliance
Location &
Maps
more
  • Sequence Map
    Chr4:143573067-143580207 bp, + strand
    From NCBI annotation of GRCm39
  • View this region in JBrowse

  • Genome Browsers
  • Genetic Map
    Chromosome 4, 77.98 cM
Strain
Comparison
more
  • SNPs within 2kb
    87 from dbSNP Build 142
  • Strain Annotations
    9
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_3650203
protein coding gene Chr4:143573067-143580207 (+)
129S1/SvImJ MGP_129S1SvImJ_G0029077
protein coding gene Chr4:147132502-147146844 (+)
A/J MGP_AJ_G0029044
protein coding gene Chr4:140761981-140774009 (+)
AKR/J no annotation
BALB/cJ MGP_BALBcJ_G0029061
protein coding gene Chr4:141425225-141433039 (+)
C3H/HeJ no annotation
C57BL/6NJ MGP_C57BL6NJ_G0029497
protein coding gene Chr4:151926073-151928189 (-)
CAROLI/EiJ no annotation
CAST/EiJ MGP_CASTEiJ_G0028201
protein coding gene Chr4:143419842-143464716 (+)
CBA/J no annotation
DBA/2J no annotation
FVB/NJ no annotation
LP/J MGP_LPJ_G0028988
protein coding gene Chr4:147196360-147235218 (+)
NOD/ShiLtJ no annotation
NZO/HlLtJ MGP_NZOHlLtJ_G0029537
protein coding gene Chr4:145089441-145095109 (-)
PWK/PhJ MGP_PWKPhJ_G0027924
protein coding gene Chr4:138051205-138071939 (-)
SPRET/EiJ no annotation
WSB/EiJ no annotation



Homology
less
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    5 phenotype references
Gene Ontology
(GO)
Classifications
less
  • All GO Annotations
  • GO References
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
  • cDNA Data
Interactions
less
Sequences &
Gene Models
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Representative SequencesLengthStrain/SpeciesFlank
genomic 194225 NCBI Gene Model | MGI Sequence Detail 7141 C57BL/6J ±  kb
transcript NM_177571 RefSeq | MGI Sequence Detail 1833 C57BL/6  
polypeptide NP_808239 RefSeq | MGI Sequence Detail 491 C57BL/6  
For the selected sequence
Protein
Information
less
  • UniProt
    4 Sequences
  • InterPro Domains
    IPR032675 Leucine-rich repeat domain superfamily
    IPR026271 PRAME family
Molecular
Reagents
less
  • All nucleic 6
    cDNA 6

    Microarray probesets 2
References
more
  • Summaries
    All 18
    Gene Ontology 1
    Phenotypes 5
  • Earliest
    J:84714 Nishijima I, et al., Two new balancer chromosomes on mouse chromosome 4 to facilitate functional annotation of human chromosome 1p. Genesis. 2003 Jul;36(3):142-8
  • Latest
    J:265628 Gaudet P, et al., Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. Brief Bioinform. 2011 Sep;12(5):449-62

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
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last database update
11/22/2022
MGI 6.22
The Jackson Laboratory