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Pramef17 Gene Detail
Summary
  • Symbol
    Pramef17
  • Name
    PRAME family member 17
  • Synonyms
    Gm13107
  • Feature Type
    protein coding gene
  • IDs
    MGI:3650199
    NCBI Gene: 626943
  • Alliance
Location &
Maps
more
  • Sequence Map
    Chr4:143991127-143994369 bp, - strand
  • From NCBI annotation of GRCm38

    View this region in JBrowse

  • Genome Browsers
  • Genetic Map
    Chromosome 4, 77.98 cM
Strain
Comparison
more
  • SNPs within 2kb
    23 from dbSNP Build 142
  • Strain Annotations
    14
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_3650199
protein coding gene Chr4:143991119-143994369 (-)
129S1/SvImJ MGP_129S1SvImJ_G0029082
protein coding gene Chr4:147680787-147684033 (+)
A/J MGP_AJ_G0029052
protein coding gene Chr4:141402946-141407100 (+)
AKR/J MGP_AKRJ_G0028999
protein coding gene Chr4:145361898-145365838 (+)
BALB/cJ MGP_BALBcJ_G0029070
protein coding gene Chr4:142019456-142022680 (+)
C3H/HeJ MGP_C3HHeJ_G0028785
protein coding gene Chr4:145806174-145809398 (+)
C57BL/6NJ no annotation
CAROLI/EiJ MGP_CAROLIEiJ_G0026768
protein coding gene Chr4:133926895-133930255 (+)
CAST/EiJ MGP_CASTEiJ_G0028204
protein coding gene Chr4:143902290-143905531 (+)
CBA/J MGP_CBAJ_G0028747
protein coding gene Chr4:157416624-157419848 (+)
DBA/2J MGP_DBA2J_G0028893
protein coding gene Chr4:141262414-141265650 (-)
FVB/NJ no annotation
LP/J MGP_LPJ_G0028989
protein coding gene Chr4:147363039-147369605 (-)
NOD/ShiLtJ MGP_NODShiLtJ_G0028893
protein coding gene Chr4:160991735-161016011 (+)
NZO/HlLtJ MGP_NZOHlLtJ_G0029544
protein coding gene Chr4:145440666-145444323 (-)
PWK/PhJ no annotation
SPRET/EiJ MGP_SPRETEiJ_G0027757
protein coding gene Chr4:141116996-141121631 (+)
WSB/EiJ no annotation



Homology
less
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    6 phenotype references
Gene Ontology
(GO)
Classifications
less
  • All GO Annotations
  • GO References
Expression
less
Interactions
less
Sequences &
Gene Models
less
Representative SequencesLengthStrain/SpeciesFlank
genomic 626943 NCBI Gene Model | MGI Sequence Detail 3243 C57BL/6J ±  kb
transcript NM_001085540 RefSeq | MGI Sequence Detail 1745 C57BL/6  
polypeptide NP_001079009 RefSeq | MGI Sequence Detail 475 C57BL/6  
For the selected sequence
Protein
Information
less
  • UniProt
    1 Sequence
  • InterPro Domains
    IPR032675 Leucine-rich repeat domain superfamily
    IPR026271 PRAME family
References
more
  • Summaries
    All 15
    Gene Ontology 1
    Phenotypes 6
  • Earliest
    J:84714 Nishijima I, et al., Two new balancer chromosomes on mouse chromosome 4 to facilitate functional annotation of human chromosome 1p. Genesis. 2003 Jul;36(3):142-8
  • Latest
    J:265628 Gaudet P, et al., Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. Brief Bioinform. 2011 Sep;12(5):449-62

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB), Gene Ontology (GO)
Citing These Resources
Funding Information
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last database update
11/05/2019
MGI 6.14
The Jackson Laboratory