Gm13504 Pseudogene Detail

Summary

• Symbol
  Gm13504
• Name
  predicted gene 13504

• Feature Type
  pseudogene
• IDs
  MGI:3650156
• Alliance
  gene page

Location &
Maps

• Sequence Map
  Chr2:39127138-39127453 bp, - strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 2, 24.45 cM

Strain
Comparison

• SNPs within 2kb
  2 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_3650156	pseudogene	Chr2:39127138-39127453 (-)
129S1/SvImJ	MGP_129S1SvImJ_G0011603	pseudogene	Chr2:38054047-38054362 (-)
A/J	MGP_AJ_G0011601	pseudogene	Chr2:36492420-36492735 (-)
AKR/J	MGP_AKRJ_G0011566	pseudogene	Chr2:37701479-37701794 (-)
BALB/cJ	MGP_BALBcJ_G0011581	pseudogene	Chr2:36564569-36564884 (-)
C3H/HeJ	MGP_C3HHeJ_G0011467	pseudogene	Chr2:37598542-37598857 (-)
C57BL/6NJ	MGP_C57BL6NJ_G0011874	pseudogene	Chr2:39115198-39115513 (-)
CAROLI/EiJ	MGP_CAROLIEiJ_G0010402	pseudogene	Chr2:35095348-35095663 (-)
CAST/EiJ	MGP_CASTEiJ_G0011263	pseudogene	Chr2:37558365-37558680 (-)
CBA/J	MGP_CBAJ_G0011438	pseudogene	Chr2:40565624-40565939 (-)
DBA/2J	MGP_DBA2J_G0011495	pseudogene	Chr2:36217169-36217484 (-)
FVB/NJ	MGP_FVBNJ_G0011496	pseudogene	Chr2:36086935-36087250 (-)
LP/J	MGP_LPJ_G0011560	pseudogene	Chr2:37924744-37925059 (-)
NOD/ShiLtJ	MGP_NODShiLtJ_G0011495	pseudogene	Chr2:40157168-40157483 (-)
NZO/HlLtJ	MGP_NZOHlLtJ_G0011865	pseudogene	Chr2:37583003-37583318 (-)
PWK/PhJ	MGP_PWKPhJ_G0011121	pseudogene	Chr2:36130255-36130572 (-)
SPRET/EiJ	MGP_SPRETEiJ_G0010940	pseudogene	Chr2:37662819-37663134 (-)
WSB/EiJ	MGP_WSBEiJ_G0011287	pseudogene	Chr2:37744070-37744385 (-)

Homology

• Gene Tree
  Gm13504
  

Expression

• Assay Results
  706

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  20

• Ensembl
  ENSMUSG00000083686 (Evidence)

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000083686	Ensembl Gene Model | MGI Sequence Detail	316	C57BL/6J
transcript	ENSMUST00000117490	Ensembl | MGI Sequence Detail	316	Not Applicable

References

• Summaries
  All 3
• Earliest
  J:23000 MGD Nomenclature Committee, Nomenclature Committee Use. 1995-02-14;
• Latest
  J:109762 Mouse Genome Informatics and VEGA Genome Database Project, Collaboration to Associate VEGA (Vertebrate Genome Annotation) Mouse Gene Models with MGI Markers. Database Release. 2006;