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Gm12825 Pseudogene Detail
Summary
  • Symbol
    Gm12825
  • Name
    predicted gene 12825
Location &
Maps
more
  • Sequence Map
    Chr4:113953587-113954598 bp, - strand
    From Ensembl annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
    Ensembl | UCSC | NCBI
  • Genetic Map
    Chromosome 4, 51.53 cM
Strain
Comparison
more
  • SNPs within 2kb
    74 from dbSNP Build 142
  • Strain Annotations
    17
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_3650153
 pseudogene Chr4:113953519-113954641 (-)
129S1/SvImJ MGP_129S1SvImJ_G0040367
 pseudogene Chr4:114820894-114821903 (-)
A/J MGP_AJ_G0040344
 pseudogene Chr4:110427149-110428158 (-)
AKR/J MGP_AKRJ_G0040272
 pseudogene Chr4:112689537-112690545 (-)
BALB/cJ MGP_BALBcJ_G0040345
 pseudogene Chr4:111073627-111074636 (-)
C3H/HeJ MGP_C3HHeJ_G0039971
 pseudogene Chr4:114353005-114354014 (-)
C57BL/6NJ MGP_C57BL6NJ_G0040950
 pseudogene Chr4:119236222-119237233 (-)
CAROLI/EiJ no annotation
CAST/EiJ MGP_CASTEiJ_G0039044
 pseudogene Chr4:111647292-111648301 (-)
CBA/J MGP_CBAJ_G0039935
 pseudogene Chr4:122362473-122363482 (-)
DBA/2J MGP_DBA2J_G0040142
 pseudogene Chr4:111089738-111090747 (-)
FVB/NJ MGP_FVBNJ_G0040098
 pseudogene Chr4:109547173-109548182 (-)
LP/J MGP_LPJ_G0040188
 pseudogene Chr4:115017958-115018967 (-)
NOD/ShiLtJ MGP_NODShiLtJ_G0040091
 pseudogene Chr4:127549562-127550571 (-)
NZO/HlLtJ MGP_NZOHlLtJ_G0041040
 pseudogene Chr4:113948825-113949836 (-)
PWK/PhJ MGP_PWKPhJ_G0038735
 pseudogene Chr4:107840016-107841025 (-)
SPRET/EiJ MGP_SPRETEiJ_G0038438
 pseudogene Chr4:110391348-110392357 (-)
WSB/EiJ MGP_WSBEiJ_G0039287
 pseudogene Chr4:113728441-113729450 (-)



Homology
less
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    5 phenotype references
  • All Mutations and Alleles
    4
  • Chemically induced (other)
    2
  • Endonuclease-mediated
    1
  • Radiation induced
    1
  • Genomic Mutations
    4 involving Gm12825
  • Find Mice (IMSR)
    0 strains or lines available
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
    706
Sequences &
Gene Models
less
  • All Sequences
    21
  • RefSeq
    1
Representative SequencesLengthStrain/SpeciesFlank
genomic ENSMUSG00000080696 Ensembl Gene Model | MGI Sequence Detail 1012 C57BL/6J ±  kb
transcript ENSMUST00000120249 Ensembl | MGI Sequence Detail 563 Not Applicable  
For the selected sequence
References
more
  • Summaries
    All 10
    Phenotypes 5
  • Earliest
    J:262448 Narita T, et al., Mice lacking all of the Skint family genes. Int Immunol. 2018 Apr 26;
  • Latest
    J:323863 McKenzie DR, et al., Normality sensing licenses local T cells for innate-like tissue surveillance. Nat Immunol. 2022 Mar;23(3):411-422
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
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Send questions and comments to User Support. 		last database update
04/30/2024
MGI 6.23 		The Jackson Laboratory