Gm12094 Pseudogene Detail

Summary

• Symbol
  Gm12094
• Name
  predicted gene 12094

• Feature Type
  pseudogene
• IDs
  MGI:3650094
  NCBI Gene: 108167891
• Alliance
  genome feature page

Location &
Maps

• Sequence Map
  Chr11:29790375-29790846 bp, + strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 11, 16.99 cM

Strain
Comparison

• SNPs within 2kb
  133 from dbSNP Build 142
• Strain Annotations
  19

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_3650094	pseudogene	Chr11:29790360-29790885 (+)
129S1/SvImJ	ENSMUSG00200010940	pseudogene	Chr11:26823760-26824231 (+)
A/J	ENSMUSG00195014922	pseudogene	Chr11:26714307-26714778 (+)
AKR/J	ENSMUSG00220008584	pseudogene	Chr11:26924976-26925447 (+)
BALB/cJ	ENSMUSG00180008199	pseudogene	Chr11:26734920-26735391 (+)
C3H/HeJ	ENSMUSG00175017152	pseudogene	Chr11:26740850-26741321 (+)
C57BL/6NJ	ENSMUSG00215010841	pseudogene	Chr11:26694984-26695455 (+)
CAROLI/EiJ	MGP_CAROLIEiJ_G0009540	pseudogene	Chr11:25465277-25465746 (+)
CAST/EiJ	ENSTCUG00005029784	pseudogene	Chr11:26587515-26587986 (+)
CBA/J	ENSMUSG00210010143	pseudogene	Chr11:26699970-26700441 (+)
DBA/2J	ENSMUSG00185019852	pseudogene	Chr11:26800423-26800894 (+)
FVB/NJ	ENSMUSG00205022041	pseudogene	Chr11:26790131-26790602 (+)
JF1/MsJ	ENSUMUG00000012082	pseudogene	Chr11:27058760-27059231 (+)
LP/J	ENSMUSG00230015987	pseudogene	Chr11:27956034-27956505 (+)
NOD/ShiLtJ	ENSMUSG00190026916	pseudogene	Chr11:26932312-26932783 (+)
NZO/HlLtJ	ENSMUSG00225022437	pseudogene	Chr11:29888669-29889140 (+)
PWK/PhJ	ENSLUMG00010017724	pseudogene	Chr11:26705376-26705847 (+)
SPRET/EiJ	ENSMSPG00010020364	pseudogene	Chr11:27018704-27019177 (+)
WSB/EiJ	ENSIUOG00005013337	pseudogene	Chr11:26802775-26803246 (+)

Homology

• Gene Tree
  Gm12094
  

Mutations,
Alleles, and
Phenotypes

• Phenotype Summary
  3 phenotype references
  

• All Mutations and Alleles
  1
• Chemically induced (other)
  1
• Genomic Mutations
  1 involving Gm12094
• Find Mice (IMSR)
  0 strains or lines available

Expression

• Assay Results
  597

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  22

• Ensembl
  ENSMUSG00000080851 (Evidence)
• NCBI Gene
  108167891

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000080851	Ensembl Gene Model | MGI Sequence Detail	472	C57BL/6J
transcript	ENSMUST00000121781	Ensembl | MGI Sequence Detail	472	Not Applicable

References

• Summaries
  All 9

  Phenotypes 3
• Earliest
  J:137335 Roderick TH, Chromosomal inversions in studies of mammalian mutagenesis. Genetics. 1979 May;92(1 Pt 1 Suppl):s121-6