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Gm11971 Pseudogene Detail
Summary
  • Symbol
    Gm11971
  • Name
    predicted gene 11971
Location &
Maps
more
  • Sequence Map
    Chr11:6403151-6403438 bp, + strand
    From Ensembl annotation of GRCm39
  • View this region in JBrowse

  • Genome Browsers
  • Genetic Map
    Chromosome 11, 4.11 cM
Strain
Comparison
more
  • SNPs within 2kb
    11 from dbSNP Build 142
  • Strain Annotations
    12
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_3650054
pseudogene Chr11:6403136-6403613 (+)
129S1/SvImJ MGP_129S1SvImJ_G0010572
pseudogene Chr11:3573796-3574083 (+)
A/J MGP_AJ_G0010565
pseudogene Chr11:3419465-3419752 (+)
AKR/J MGP_AKRJ_G0010526
pseudogene Chr11:3594707-3594994 (+)
BALB/cJ MGP_BALBcJ_G0010540
pseudogene Chr11:3426781-3427068 (+)
C3H/HeJ MGP_C3HHeJ_G0010462
pseudogene Chr11:3458451-3458738 (+)
C57BL/6NJ MGP_C57BL6NJ_G0010809
pseudogene Chr11:3673889-3674176 (+)
CAROLI/EiJ no annotation
CAST/EiJ no annotation
CBA/J MGP_CBAJ_G0010434
pseudogene Chr11:4090512-4090799 (+)
DBA/2J MGP_DBA2J_G0010464
pseudogene Chr11:3332792-3333079 (+)
FVB/NJ no annotation
LP/J MGP_LPJ_G0010554
pseudogene Chr11:3644666-3644953 (+)
NOD/ShiLtJ MGP_NODShiLtJ_G0010458
pseudogene Chr11:3629356-3629643 (+)
NZO/HlLtJ MGP_NZOHlLtJ_G0010787
pseudogene Chr11:3610567-3610837 (+)
PWK/PhJ no annotation
SPRET/EiJ no annotation
WSB/EiJ no annotation



Homology
less
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
Sequences &
Gene Models
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  • All Sequences
  • RefSeq
Representative SequencesLengthStrain/SpeciesFlank
genomic ENSMUSG00000083693 Ensembl Gene Model | MGI Sequence Detail 288 C57BL/6J ±  kb
transcript ENSMUST00000117715 Ensembl | MGI Sequence Detail 288 Not Applicable  
polypeptide XP_036013016 RefSeq | MGI Sequence Detail 95 C57BL/6J  
For the selected sequence
References
more
  • Summaries
    All 5
  • Earliest
    J:23000 MGD Nomenclature Committee, Nomenclature Committee Use. 2/14/1995;
  • Latest
    J:109762 Mouse Genome Informatics and VEGA Genome Database Project, Collaboration to Associate VEGA (Vertebrate Genome Annotation) Mouse Gene Models with MGI Markers. Database Release. 2006;

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB), Gene Ontology (GO)
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last database update
06/23/2022
MGI 6.20
The Jackson Laboratory