Gm13732 Pseudogene Detail

Summary

• Symbol
  Gm13732
• Name
  predicted gene 13732

• Feature Type
  pseudogene
• IDs
  MGI:3650014
  NCBI Gene: 100418340
• Alliance
  gene page

Location &
Maps

• Sequence Map
  Chr2:87095259-87095793 bp, + strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 2, 49.86 cM

Strain
Comparison

• SNPs within 2kb
  4 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_3650014	pseudogene	Chr2:87095259-87095995 (+)
129S1/SvImJ	MGP_129S1SvImJ_G0011747	pseudogene	Chr2:88336136-88336661 (+)
A/J	MGP_AJ_G0011739	pseudogene	Chr2:84726672-84727206 (+)
AKR/J	MGP_AKRJ_G0011706	pseudogene	Chr2:87074318-87074852 (+)
BALB/cJ	MGP_BALBcJ_G0011718	pseudogene	Chr2:84950061-84950595 (+)
C3H/HeJ	MGP_C3HHeJ_G0011605	pseudogene	Chr2:87315194-87315728 (+)
C57BL/6NJ	MGP_C57BL6NJ_G0012015	pseudogene	Chr2:91218927-91219461 (+)
CAROLI/EiJ	MGP_CAROLIEiJ_G0010522	pseudogene	Chr2:81531986-81532513 (+)
CAST/EiJ	MGP_CASTEiJ_G0011392	pseudogene	Chr2:87793844-87794378 (+)
CBA/J	MGP_CBAJ_G0011580	pseudogene	Chr2:94235439-94235973 (+)
DBA/2J	MGP_DBA2J_G0011630	pseudogene	Chr2:84350274-84350808 (+)
FVB/NJ	MGP_FVBNJ_G0011636	pseudogene	Chr2:83432444-83432978 (+)
LP/J	MGP_LPJ_G0011703	pseudogene	Chr2:88342114-88342639 (+)
NOD/ShiLtJ	MGP_NODShiLtJ_G0011637	pseudogene	Chr2:96976852-96977386 (+)
NZO/HlLtJ	MGP_NZOHlLtJ_G0012011	pseudogene	Chr2:87203624-87204158 (+)
PWK/PhJ	MGP_PWKPhJ_G0011245	pseudogene	Chr2:84285932-84305754 (+)
SPRET/EiJ	MGP_SPRETEiJ_G0011069	pseudogene	Chr2:87242585-87243110 (+)
WSB/EiJ	MGP_WSBEiJ_G0011714	pseudogene	Chr3:18147828-18148335 (+)

Homology

• Gene Tree
  Gm13732
  

Mutations,
Alleles, and
Phenotypes

• Phenotype Summary
  5 phenotype references
  

• All Mutations and Alleles
  3
• Chemically induced (other)
  1
• Targeted
  2
• Genomic Mutations
  3 involving Gm13732
• Find Mice (IMSR)
  0 strains or lines available

Expression

• Assay Results
  706

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  22
• RefSeq
  1

• Ensembl
  ENSMUSG00000084043 (Evidence)
• NCBI Gene
  100418340

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000084043	Ensembl Gene Model | MGI Sequence Detail	535	C57BL/6J
transcript	ENSMUST00000117753	Ensembl | MGI Sequence Detail	535	Not Applicable

References

• Summaries
  All 10

  Phenotypes 5
• Earliest
  J:100298 Spitz F, et al., Inversion-induced disruption of the Hoxd cluster leads to the partition of regulatory landscapes. Nat Genet. 2005 Aug;37(8):889-93
• Latest
  J:269738 Guerreiro I, et al., Reorganisation of Hoxd regulatory landscapes during the evolution of a snake-like body plan. Elife. 2016 Aug 1;5:e16087