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Gm13088 Gene Detail
Summary
  • Symbol
    Gm13088
  • Name
    predicted gene 13088
  • Feature Type
    protein coding gene
  • IDs
    MGI:3649971
    NCBI Gene: 277668
  • Alliance
Location &
Maps
more
  • Sequence Map
    Chr4:143653760-143657246 bp, - strand
  • From Ensembl annotation of GRCm38

    View this region in JBrowse

  • Genome Browsers
  • Genetic Map
    Chromosome 4, 77.85 cM
Strain
Comparison
more
  • SNPs within 2kb
    72 from dbSNP Build 142
  • Strain Annotations
    13
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_3649971
protein coding gene Chr4:143653760-143660598 (-)
129S1/SvImJ MGP_129S1SvImJ_G0029078
protein coding gene Chr4:147144036-147146844 (+)
A/J MGP_AJ_G0029045
protein coding gene Chr4:140768015-140772562 (+)
AKR/J MGP_AKRJ_G0028986
protein coding gene Chr4:144539885-144543478 (-)
BALB/cJ MGP_BALBcJ_G0029065
protein coding gene Chr4:141719504-141722997 (-)
C3H/HeJ MGP_C3HHeJ_G0028771
protein coding gene Chr4:144936694-144941499 (-)
C57BL/6NJ MGP_C57BL6NJ_G0029496
protein coding gene Chr4:151925715-151927655 (-)
CAROLI/EiJ no annotation
CAST/EiJ MGP_CASTEiJ_G0028202
protein coding gene Chr4:143463669-143466429 (+)
CBA/J MGP_CBAJ_G0028743
protein coding gene Chr4:157136215-157141010 (-)
DBA/2J no annotation
FVB/NJ MGP_FVBNJ_G0028850
protein coding gene Chr4:139997395-140000987 (-)
LP/J no annotation
NOD/ShiLtJ no annotation
NZO/HlLtJ MGP_NZOHlLtJ_G0029538
protein coding gene Chr4:145089441-145093047 (-)
PWK/PhJ MGP_PWKPhJ_G0027925
protein coding gene Chr4:138051205-138054691 (-)
SPRET/EiJ no annotation
WSB/EiJ MGP_WSBEiJ_G0028281
protein coding gene Chr4:145375435-145379425 (-)



Homology
less
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    5 phenotype references
Gene Ontology
(GO)
Classifications
less
  • All GO Annotations
  • GO References
Expression
less
Interactions
less
Sequences &
Gene Models
less
Representative SequencesLengthStrain/SpeciesFlank
genomic ENSMUSG00000078513 Ensembl Gene Model | MGI Sequence Detail 3487 C57BL/6J ±  kb
transcript ENSMUST00000105771 Ensembl | MGI Sequence Detail 1819 Not Applicable  
polypeptide ENSMUSP00000101397 Ensembl | MGI Sequence Detail 460 Not Applicable  
For the selected sequence
Protein
Information
less
  • UniProt
    1 Sequence
  • InterPro Domains
    IPR032675 Leucine-rich repeat domain superfamily
    IPR026271 PRAME family
References
more
  • Summaries
    All 14
    Gene Ontology 1
    Phenotypes 5
  • Earliest
    J:84714 Nishijima I, et al., Two new balancer chromosomes on mouse chromosome 4 to facilitate functional annotation of human chromosome 1p. Genesis. 2003 Jul;36(3):142-8
  • Latest
    J:265628 Gaudet P, et al., Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. Brief Bioinform. 2011 Sep;12(5):449-62

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB), Gene Ontology (GO)
Citing These Resources
Funding Information
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last database update
10/08/2019
MGI 6.14
The Jackson Laboratory