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Pramel22 Gene Detail
Summary
  • Symbol
    Pramel22
  • Name
    PRAME like 22
  • Synonyms
    Gm13088
  • Feature Type
    protein coding gene
  • IDs
    MGI:3649971
    NCBI Gene: 277668
  • Alliance
Location &
Maps
more
  • Sequence Map
    Chr4:143653760-143657246 bp, - strand
  • From Ensembl annotation of GRCm38

    View this region in JBrowse

  • Genome Browsers
  • Genetic Map
    Chromosome 4, 77.85 cM
Strain
Comparison
more
  • SNPs within 2kb
    72 from dbSNP Build 142
  • Strain Annotations
    13
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_3649971
protein coding gene Chr4:143653760-143660598 (-)
129S1/SvImJ MGP_129S1SvImJ_G0029078
protein coding gene Chr4:147144036-147146844 (+)
A/J MGP_AJ_G0029045
protein coding gene Chr4:140768015-140772562 (+)
AKR/J MGP_AKRJ_G0028986
protein coding gene Chr4:144539885-144543478 (-)
BALB/cJ MGP_BALBcJ_G0029065
protein coding gene Chr4:141719504-141722997 (-)
C3H/HeJ MGP_C3HHeJ_G0028771
protein coding gene Chr4:144936694-144941499 (-)
C57BL/6NJ MGP_C57BL6NJ_G0029496
protein coding gene Chr4:151925715-151927655 (-)
CAROLI/EiJ no annotation
CAST/EiJ MGP_CASTEiJ_G0028202
protein coding gene Chr4:143463669-143466429 (+)
CBA/J MGP_CBAJ_G0028743
protein coding gene Chr4:157136215-157141010 (-)
DBA/2J no annotation
FVB/NJ MGP_FVBNJ_G0028850
protein coding gene Chr4:139997395-140000987 (-)
LP/J no annotation
NOD/ShiLtJ no annotation
NZO/HlLtJ MGP_NZOHlLtJ_G0029538
protein coding gene Chr4:145089441-145093047 (-)
PWK/PhJ MGP_PWKPhJ_G0027925
protein coding gene Chr4:138051205-138054691 (-)
SPRET/EiJ no annotation
WSB/EiJ MGP_WSBEiJ_G0028281
protein coding gene Chr4:145375435-145379425 (-)



Homology
less
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    5 phenotype references
Gene Ontology
(GO)
Classifications
less
  • All GO Annotations
  • GO References
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
Interactions
less
Sequences &
Gene Models
less
Representative SequencesLengthStrain/SpeciesFlank
genomic ENSMUSG00000078513 Ensembl Gene Model | MGI Sequence Detail 3487 C57BL/6J ±  kb
transcript ENSMUST00000105771 Ensembl | MGI Sequence Detail 1819 Not Applicable  
polypeptide ENSMUSP00000101397 Ensembl | MGI Sequence Detail 460 Not Applicable  
For the selected sequence
Protein
Information
less
  • UniProt
    1 Sequence
  • InterPro Domains
    IPR032675 Leucine-rich repeat domain superfamily
    IPR026271 PRAME family
References
more
  • Summaries
    All 14
    Gene Ontology 1
    Phenotypes 5
  • Earliest
    J:84714 Nishijima I, et al., Two new balancer chromosomes on mouse chromosome 4 to facilitate functional annotation of human chromosome 1p. Genesis. 2003 Jul;36(3):142-8
  • Latest
    J:265628 Gaudet P, et al., Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. Brief Bioinform. 2011 Sep;12(5):449-62

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB), Gene Ontology (GO)
Citing These Resources
Funding Information
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last database update
10/20/2020
MGI 6.16
The Jackson Laboratory