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Gm11788 Gene Detail
Summary
  • Symbol
    Gm11788
  • Name
    predicted gene 11788
  • Feature Type
    lncRNA gene
  • IDs
    MGI:3649943
    NCBI Gene: 102640850
  • Alliance
  • Transcription Start Sites
    1 TSS
Location &
Maps
more
  • Sequence Map
    Chr11:120489406-120492394 bp, - strand
  • From Ensembl annotation of GRCm38

    View this region in JBrowse

  • Genome Browsers
  • Genetic Map
    Chromosome 11, 84.19 cM
Strain
Comparison
more
  • SNPs within 2kb
    31 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_3649943
lncRNA gene Chr11:120489406-120492394 (-)
129S1/SvImJ MGP_129S1SvImJ_G0003116
antisense lncRNA gene Chr11:124958587-124961576 (-)
A/J MGP_AJ_G0003093
antisense lncRNA gene Chr11:119397746-119400735 (-)
AKR/J MGP_AKRJ_G0003074
antisense lncRNA gene Chr11:122990552-122993541 (-)
BALB/cJ MGP_BALBcJ_G0003080
antisense lncRNA gene Chr11:119753365-119756354 (-)
C3H/HeJ MGP_C3HHeJ_G0003036
antisense lncRNA gene Chr11:123326191-123329180 (-)
C57BL/6NJ MGP_C57BL6NJ_G0003223
antisense lncRNA gene Chr11:128736052-128739041 (-)
CAROLI/EiJ MGP_CAROLIEiJ_G0002757
antisense lncRNA gene Chr11:116385722-116388759 (-)
CAST/EiJ MGP_CASTEiJ_G0003005
antisense lncRNA gene Chr11:124815545-124818516 (-)
CBA/J MGP_CBAJ_G0003033
antisense lncRNA gene Chr11:133775862-133778851 (-)
DBA/2J MGP_DBA2J_G0003038
antisense lncRNA gene Chr11:118766650-118769639 (-)
FVB/NJ MGP_FVBNJ_G0003058
antisense lncRNA gene Chr11:118476821-118479810 (-)
LP/J MGP_LPJ_G0003113
antisense lncRNA gene Chr11:125260013-125263002 (-)
NOD/ShiLtJ MGP_NODShiLtJ_G0003047
antisense lncRNA gene Chr11:132617867-132620856 (-)
NZO/HlLtJ MGP_NZOHlLtJ_G0003227
antisense lncRNA gene Chr11:123676325-123679314 (-)
PWK/PhJ MGP_PWKPhJ_G0002963
antisense lncRNA gene Chr11:120200255-120203226 (-)
SPRET/EiJ MGP_SPRETEiJ_G0002907
antisense lncRNA gene Chr11:123438060-123441024 (-)
WSB/EiJ MGP_WSBEiJ_G0003036
antisense lncRNA gene Chr11:123667754-123670745 (-)



Homology
less
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    2 phenotype references
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
Sequences &
Gene Models
less
  • All Sequences
Representative SequencesLengthStrain/SpeciesFlank
genomic ENSMUSG00000086929 Ensembl Gene Model | MGI Sequence Detail 2989 C57BL/6J ±  kb
transcript ENSMUST00000142520 Ensembl | MGI Sequence Detail 562 Not Applicable  
For the selected sequence
References
more
  • Summaries
    All 6
    Phenotypes 2
  • Earliest
    J:142754 Hansen GM, et al., Large-scale gene trapping in C57BL/6N mouse embryonic stem cells. Genome Res. 2008 Oct;18(10):1670-9

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB), Gene Ontology (GO)
Citing These Resources
Funding Information
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last database update
03/24/2020
MGI 6.15
The Jackson Laboratory