Gm11619 Pseudogene Detail

Summary

• Symbol
  Gm11619
• Name
  predicted gene 11619

• Feature Type
  pseudogene
• IDs
  MGI:3649910
  NCBI Gene: 629949
• Alliance
  gene page

Location &
Maps

• Sequence Map
  Chr11:101244135-101244371 bp, - strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 11, 64.78 cM

Strain
Comparison

• SNPs within 2kb
  36 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_3649910	pseudogene	Chr11:101244135-101244371 (-)
129S1/SvImJ	MGP_129S1SvImJ_G0010842	pseudogene	Chr11:104200611-104200830 (-)
A/J	MGP_AJ_G0010840	pseudogene	Chr11:99823677-99823913 (-)
AKR/J	MGP_AKRJ_G0010800	pseudogene	Chr11:102923907-102924143 (-)
BALB/cJ	MGP_BALBcJ_G0010817	pseudogene	Chr11:100309086-100309322 (-)
C3H/HeJ	MGP_C3HHeJ_G0010720	pseudogene	Chr11:103099581-103099800 (-)
C57BL/6NJ	MGP_C57BL6NJ_G0011088	pseudogene	Chr11:107468863-107469099 (-)
CAROLI/EiJ	MGP_CAROLIEiJ_G0009702	pseudogene	Chr11:97233064-97233300 (-)
CAST/EiJ	MGP_CASTEiJ_G0010545	pseudogene	Chr11:104087858-104088094 (-)
CBA/J	MGP_CBAJ_G0010690	pseudogene	Chr11:111900813-111901049 (-)
DBA/2J	MGP_DBA2J_G0010737	pseudogene	Chr11:99350899-99351118 (-)
FVB/NJ	MGP_FVBNJ_G0010756	pseudogene	Chr11:98897248-98897484 (-)
LP/J	MGP_LPJ_G0010824	pseudogene	Chr11:104747304-104747523 (-)
NOD/ShiLtJ	MGP_NODShiLtJ_G0010730	pseudogene	Chr11:111453712-111453931 (-)
NZO/HlLtJ	MGP_NZOHlLtJ_G0011067	pseudogene	Chr11:103253849-103254085 (-)
PWK/PhJ	MGP_PWKPhJ_G0010434	pseudogene	Chr11:100407019-100407255 (-)
SPRET/EiJ	MGP_SPRETEiJ_G0010251	pseudogene	Chr11:102985888-102986126 (-)
WSB/EiJ	MGP_WSBEiJ_G0010596	pseudogene	Chr11:103251012-103251231 (-)

Homology

• Gene Tree
  Gm11619
  

Expression

• Assay Results
  706

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  20

• Ensembl
  ENSMUSG00000082478 (Evidence)
• NCBI Gene
  629949

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000082478	Ensembl Gene Model | MGI Sequence Detail	237	C57BL/6J
transcript	ENSMUST00000117474	Ensembl | MGI Sequence Detail	237	Not Applicable

References

• Summaries
  All 4
• Earliest
  J:23000 MGD Nomenclature Committee, Nomenclature Committee Use. 1995-02-14;
• Latest
  J:109762 Mouse Genome Informatics and VEGA Genome Database Project, Collaboration to Associate VEGA (Vertebrate Genome Annotation) Mouse Gene Models with MGI Markers. Database Release. 2006;