Gm13503 Pseudogene Detail

Summary

• Symbol
  Gm13503
• Name
  predicted gene 13503

• Feature Type
  pseudogene
• IDs
  MGI:3649895
  NCBI Gene: 666876
• Alliance
  gene page

Location &
Maps

• Sequence Map
  Chr2:53441938-53442383 bp, + strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 2, 30.69 cM

Strain
Comparison

• SNPs within 2kb
  1 from dbSNP Build 142
• Strain Annotations
  14

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_3649895	pseudogene	Chr2:53441893-53442383 (+)
129S1/SvImJ	MGP_129S1SvImJ_G0011640	pseudogene	Chr2:52957895-52958340 (+)
A/J	MGP_AJ_G0011639	pseudogene	Chr2:50914141-50915188 (+)
AKR/J	MGP_AKRJ_G0011603	pseudogene	Chr2:52353246-52353691 (+)
BALB/cJ	MGP_BALBcJ_G0011619	pseudogene	Chr2:51001599-51002044 (+)
C3H/HeJ	MGP_C3HHeJ_G0011505	pseudogene	Chr2:52365035-52365801 (+)
C57BL/6NJ	MGP_C57BL6NJ_G0011911	pseudogene	Chr2:54516973-54517418 (+)
CAROLI/EiJ	MGP_CAROLIEiJ_G0010437	pseudogene	Chr2:48815508-48815976 (+)
CAST/EiJ	no annotation
CBA/J	MGP_CBAJ_G0011476	pseudogene	Chr2:56563555-56564000 (+)
DBA/2J	MGP_DBA2J_G0011532	pseudogene	Chr2:50542715-50543160 (+)
FVB/NJ	MGP_FVBNJ_G0011534	pseudogene	Chr2:50216893-50217338 (+)
LP/J	MGP_LPJ_G0011598	pseudogene	Chr2:52836673-52837118 (+)
NOD/ShiLtJ	MGP_NODShiLtJ_G0011533	pseudogene	Chr2:57536156-57537140 (+)
NZO/HlLtJ	MGP_NZOHlLtJ_G0011902	pseudogene	Chr2:52291511-52291956 (+)
PWK/PhJ	no annotation
SPRET/EiJ	no annotation
WSB/EiJ	no annotation

Homology

• Gene Tree
  Gm13503
  

Mutations,
Alleles, and
Phenotypes

• Phenotype Summary
  2 phenotype references
  

• All Mutations and Alleles
  1
• Chemically induced (other)
  1
• Genomic Mutations
  1 involving Gm13503
• Find Mice (IMSR)
  0 strains or lines available

Expression

• Assay Results
  706

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  17

• Ensembl
  ENSMUSG00000080716 (Evidence)
• NCBI Gene
  666876

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000080716	Ensembl Gene Model | MGI Sequence Detail	446	C57BL/6J
transcript	ENSMUST00000119017	Ensembl | MGI Sequence Detail	446	Not Applicable

References

• Summaries
  All 7

  Phenotypes 2
• Earliest
  J:23389 Roderick TH, Using inversions to detect and study recessive lethals and detrimentals in mice, in Utilization of Mammalian Specific Locus Studies in Hazard Evaluation and Estimation of Genetic Risk. 1983:135-67.
• Latest
  J:109762 Mouse Genome Informatics and VEGA Genome Database Project, Collaboration to Associate VEGA (Vertebrate Genome Annotation) Mouse Gene Models with MGI Markers. Database Release. 2006;