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Arhgap40 Gene Detail
Summary
  • Symbol
    Arhgap40
  • Name
    Rho GTPase activating protein 40
  • Synonyms
    Gm14203
  • Feature Type
    protein coding gene
  • IDs
    MGI:3649852
    NCBI Gene: 545481
Location & Maps
more
  • Sequence Map
    Chr2:158512796-158550762 bp, + strand
  • From VEGA annotation of GRCm38

    Mouse Genome Browser

  • Download
    Sequence
      37967 bp   ±  kb flank

  • Genome Browsers
  • Genetic Map
    Chromosome 2, 78.72 cM
  • Mapping Data
    1 experiment
Homology
more
  • Human Ortholog
    ARHGAP40, Rho GTPase activating protein 40
  • Vertebrate Orthologs
    8
  • Human Ortholog
    ARHGAP40, Rho GTPase activating protein 40
    Orthology source: HomoloGene, HGNC
  • Synonyms
    C20orf95, dJ1100H13.4
  • Links
    NCBI Gene ID: 343578
    neXtProt AC: NX_Q5TG30

  • Chr Location
    20q11.23; chr20:38601934-38650652 (+)  GRCh38.p2

Mutations,
Alleles, and
Phenotypes
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  • Phenotype Summary
    3 phenotype references
Gene Ontology
(GO)
Classifications
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  • All GO Annotations
  • GO References
Molecular Function

carbohydrate derivative binding
cytoskeletal protein binding
DNA binding
enzyme regulator
hydrolase
ligase
lipid binding
oxidoreductase
receptor
receptor binding
RNA binding
transcription
transferase
transporter
Biological Process

nucleic acid-templated transcription
carbohydrate derivative metabolism
cell death
cell differentiation
cell proliferation
cellular component organization
establishment of localization
homeostatic process
immune system process
lipid metabolic process
protein metabolic process
response to stimulus
signaling
system development
Cellular Component

cell projection
cytoplasmic vesicle
cytoskeleton
cytosol
endoplasmic reticulum
endosome
extracellular region
Golgi apparatus
mitochondrion
non-membrane-bounded organelle
nucleus
organelle envelope
organelle lumen
plasma membrane
synapse
vacuole
Click cells to view annotations.
Expression
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  • Other Mouse Links
  • Other Vertebrate Links
    Xenbase arhgap40
Interactions
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Sequences &
Gene Models
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Representative SequencesLengthStrain/SpeciesFlank
genomic OTTMUSG00000015933 VEGA Gene Model | MGI Sequence Detail 37967 C57BL/6J ±  kb
transcript OTTMUST00000037851 VEGA | MGI Sequence Detail 2162 Not Applicable  
polypeptide OTTMUSP00000016995 VEGA | MGI Sequence Detail 675 Not Applicable  
For the selected sequence
Polymorphisms
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  • SNPs within 2kb
    341 from dbSNP Build 142
Protein
Information
less
  • UniProt
    2 Sequences
  • Protein Ontology
    PR:000030342 rho GTPase-activating protein 40
  • InterPro Domains
    IPR000198 Rho GTPase-activating protein domain
    IPR008936 Rho GTPase activation protein
Molecular
Reagents
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  • Microarray probesets 1
References
more
  • Summaries
    All 15
    Gene Ontology 2
    Phenotypes 3
  • Earliest
    J:173534 Skarnes WC, et al., A conditional knockout resource for the genome-wide study of mouse gene function. Nature. 2011 Jun 16;474(7351):337-42

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
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last database update
09/20/2016
MGI 6.05
The Jackson Laboratory