Gm12513 Pseudogene Detail

Summary

• Symbol
  Gm12513
• Name
  predicted gene 12513

• Feature Type
  pseudogene
• IDs
  MGI:3649753
  NCBI Gene: 100041348
• Alliance
  gene page

Location &
Maps

• Sequence Map
  Chr4:55408956-55409307 bp, - strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 4, 29.72 cM

Strain
Comparison

• SNPs within 2kb
  29 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_3649753	pseudogene	Chr4:55408956-55409307 (-)
129S1/SvImJ	MGP_129S1SvImJ_G0012671	pseudogene	Chr4:54123805-54124156 (-)
A/J	MGP_AJ_G0012660	pseudogene	Chr4:52035632-52035983 (-)
AKR/J	MGP_AKRJ_G0012630	pseudogene	Chr4:53455190-53455541 (-)
BALB/cJ	MGP_BALBcJ_G0012643	pseudogene	Chr4:52202018-52202369 (-)
C3H/HeJ	MGP_C3HHeJ_G0012502	pseudogene	Chr4:53979584-53979935 (-)
C57BL/6NJ	MGP_C57BL6NJ_G0012969	pseudogene	Chr4:56067670-56068021 (-)
CAROLI/EiJ	MGP_CAROLIEiJ_G0011275	pseudogene	Chr4:48914420-48914764 (-)
CAST/EiJ	MGP_CASTEiJ_G0012259	pseudogene	Chr4:53672152-53672503 (-)
CBA/J	MGP_CBAJ_G0012482	pseudogene	Chr4:57979882-57980233 (-)
DBA/2J	MGP_DBA2J_G0012540	pseudogene	Chr4:51965406-51965757 (-)
FVB/NJ	MGP_FVBNJ_G0012541	pseudogene	Chr4:51194344-51194695 (-)
LP/J	MGP_LPJ_G0012612	pseudogene	Chr4:54206664-54207015 (-)
NOD/ShiLtJ	MGP_NODShiLtJ_G0012549	pseudogene	Chr4:61180697-61181048 (-)
NZO/HlLtJ	MGP_NZOHlLtJ_G0012972	pseudogene	Chr4:53669679-53670030 (-)
PWK/PhJ	MGP_PWKPhJ_G0012085	pseudogene	Chr4:51940221-51940572 (-)
SPRET/EiJ	MGP_SPRETEiJ_G0011899	pseudogene	Chr4:52945402-52945753 (-)
WSB/EiJ	MGP_WSBEiJ_G0012280	pseudogene	Chr4:53584036-53584387 (-)

Homology

• Gene Tree
  Gm12513
  

Expression

• Assay Results
  706

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  20

• Ensembl
  ENSMUSG00000084404 (Evidence)
• NCBI Gene
  100041348

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000084404	Ensembl Gene Model | MGI Sequence Detail	352	C57BL/6J
transcript	ENSMUST00000118617	Ensembl | MGI Sequence Detail	352	Not Applicable

References

• Summaries
  All 4
• Earliest
  J:23000 MGD Nomenclature Committee, Nomenclature Committee Use. 1995-02-14;
• Latest
  J:109762 Mouse Genome Informatics and VEGA Genome Database Project, Collaboration to Associate VEGA (Vertebrate Genome Annotation) Mouse Gene Models with MGI Markers. Database Release. 2006;