Gm13062 Gene Detail

Summary

• Symbol
  Gm13062
• Name
  predicted gene 13062

• Feature Type
  lncRNA gene
• IDs
  MGI:3649476
• Alliance
  gene page

Location &
Maps

• Sequence Map
  Chr4:141907913-141911450 bp, + strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 4, 75.46 cM

Strain
Comparison

• SNPs within 2kb
  91 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_3649476	lncRNA gene	Chr4:141907913-141911450 (+)
129S1/SvImJ	MGP_129S1SvImJ_G0003994	antisense lncRNA gene	Chr4:145326221-145329754 (+)
A/J	MGP_AJ_G0003975	antisense lncRNA gene	Chr4:138966759-138970305 (+)
AKR/J	MGP_AKRJ_G0003952	antisense lncRNA gene	Chr4:143003033-143006573 (+)
BALB/cJ	MGP_BALBcJ_G0003961	antisense lncRNA gene	Chr4:139660804-139664350 (+)
C3H/HeJ	MGP_C3HHeJ_G0003908	antisense lncRNA gene	Chr4:143370393-143373933 (+)
C57BL/6NJ	MGP_C57BL6NJ_G0004109	antisense lncRNA gene	Chr4:150353705-150357242 (+)
CAROLI/EiJ	MGP_CAROLIEiJ_G0003592	antisense lncRNA gene	Chr4:131864055-131867590 (+)
CAST/EiJ	MGP_CASTEiJ_G0003871	antisense lncRNA gene	Chr4:141645163-141648696 (+)
CBA/J	MGP_CBAJ_G0003901	antisense lncRNA gene	Chr4:154828098-154831638 (+)
DBA/2J	MGP_DBA2J_G0003917	antisense lncRNA gene	Chr4:139354687-139358222 (+)
FVB/NJ	MGP_FVBNJ_G0003936	antisense lncRNA gene	Chr4:138498494-138502029 (+)
LP/J	MGP_LPJ_G0003997	antisense lncRNA gene	Chr4:145334673-145338206 (+)
NOD/ShiLtJ	MGP_NODShiLtJ_G0003924	antisense lncRNA gene	Chr4:158510950-158514485 (+)
NZO/HlLtJ	MGP_NZOHlLtJ_G0004104	antisense lncRNA gene	Chr4:143538002-143541535 (+)
PWK/PhJ	MGP_PWKPhJ_G0003825	antisense lncRNA gene	Chr4:136253397-136256932 (+)
SPRET/EiJ	MGP_SPRETEiJ_G0003771	antisense lncRNA gene	Chr4:139339536-139343129 (+)
WSB/EiJ	MGP_WSBEiJ_G0003907	antisense lncRNA gene	Chr4:143810571-143814104 (+)

Homology

• Gene Tree
  Gm13062
  

Mutations,
Alleles, and
Phenotypes

• Phenotype Summary
  4 phenotype references
  

• All Mutations and Alleles
  3
• Chemically induced (other)
  1
• Gene trapped
  1
• Targeted
  1
• Genomic Mutations
  2 involving Gm13062
• Find Mice (IMSR)
  0 strains or lines available

Gene Ontology
(GO)
Classifications

Expression

• Assay Results
  706

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  20

• Ensembl
  ENSMUSG00000087525 (Evidence)

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000087525	Ensembl Gene Model | MGI Sequence Detail	3538	C57BL/6J
transcript	ENSMUST00000151337	Ensembl | MGI Sequence Detail	562	Not Applicable

References

• Summaries
  All 8

  Phenotypes 4
• Earliest
  J:84714 Nishijima I, et al., Two new balancer chromosomes on mouse chromosome 4 to facilitate functional annotation of human chromosome 1p. Genesis. 2003 Jul;36(3):142-8