Gm11708 Pseudogene Detail

Summary

• Symbol
  Gm11708
• Name
  predicted gene 11708

• Feature Type
  pseudogene
• IDs
  MGI:3649475
  NCBI Gene: 100417144
• Alliance
  gene page

Location &
Maps

• Sequence Map
  Chr11:106894735-106895566 bp, - strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 11, 70.09 cM

Strain
Comparison

• SNPs within 2kb
  19 from dbSNP Build 142
• Strain Annotations
  14

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_3649475	pseudogene	Chr11:106894538-106895610 (-)
129S1/SvImJ	MGP_129S1SvImJ_G0010861	pseudogene	Chr11:110358920-110359751 (-)
A/J	MGP_AJ_G0010858	pseudogene	Chr11:105638254-105639085 (-)
AKR/J	MGP_AKRJ_G0010818	pseudogene	Chr11:108779444-108780275 (-)
BALB/cJ	MGP_BALBcJ_G0010836	pseudogene	Chr11:106049591-106050422 (-)
C3H/HeJ	MGP_C3HHeJ_G0010737	pseudogene	Chr11:109080408-109081239 (-)
C57BL/6NJ	MGP_C57BL6NJ_G0011107	pseudogene	Chr11:113770819-113771650 (-)
CAROLI/EiJ	no annotation
CAST/EiJ	no annotation
CBA/J	MGP_CBAJ_G0010708	pseudogene	Chr11:118466153-118466984 (-)
DBA/2J	MGP_DBA2J_G0010755	pseudogene	Chr11:105113490-105114321 (-)
FVB/NJ	MGP_FVBNJ_G0010772	pseudogene	Chr11:104616651-104617482 (-)
LP/J	MGP_LPJ_G0010843	pseudogene	Chr11:110806748-110807579 (-)
NOD/ShiLtJ	MGP_NODShiLtJ_G0010748	pseudogene	Chr11:117697210-117698041 (-)
NZO/HlLtJ	MGP_NZOHlLtJ_G0011086	pseudogene	Chr11:109308096-109308927 (-)
PWK/PhJ	no annotation
SPRET/EiJ	no annotation
WSB/EiJ	MGP_WSBEiJ_G0010614	pseudogene	Chr11:109275055-109275886 (-)

Homology

• Gene Tree
  Gm11708
  

Expression

• Assay Results
  706

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  18
• RefSeq
  1

• Ensembl
  ENSMUSG00000083356 (Evidence)
• NCBI Gene
  100417144

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000083356	Ensembl Gene Model | MGI Sequence Detail	832	C57BL/6J
transcript	ENSMUST00000119530	Ensembl | MGI Sequence Detail	832	Not Applicable

References

• Summaries
  All 5
• Earliest
  J:23000 MGD Nomenclature Committee, Nomenclature Committee Use. 1995-02-14;
• Latest
  J:109762 Mouse Genome Informatics and VEGA Genome Database Project, Collaboration to Associate VEGA (Vertebrate Genome Annotation) Mouse Gene Models with MGI Markers. Database Release. 2006;