Gm13331 Pseudogene Detail

Summary

• Symbol
  Gm13331
• Name
  predicted gene 13331

• Feature Type
  pseudogene
• IDs
  MGI:3649454
  NCBI Gene: 664822
• Alliance
  gene page

Location &
Maps

• Sequence Map
  Chr2:23398872-23399319 bp, + strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 2, 15.48 cM

Strain
Comparison

• SNPs within 2kb
  20 from dbSNP Build 142
• Strain Annotations
  16

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_3649454	pseudogene	Chr2:23398623-23400150 (+)
129S1/SvImJ	MGP_129S1SvImJ_G0011560	pseudogene	Chr2:21273578-21274025 (+)
A/J	MGP_AJ_G0011558	pseudogene	Chr2:20444665-20445112 (+)
AKR/J	MGP_AKRJ_G0011523	pseudogene	Chr2:21133461-21133908 (+)
BALB/cJ	MGP_BALBcJ_G0011538	pseudogene	Chr2:20536386-20536833 (+)
C3H/HeJ	MGP_C3HHeJ_G0011423	pseudogene	Chr2:21070337-21070784 (+)
C57BL/6NJ	MGP_C57BL6NJ_G0011829	pseudogene	Chr2:21893881-21894328 (+)
CAROLI/EiJ	no annotation
CAST/EiJ	MGP_CASTEiJ_G0011222	pseudogene	Chr2:20957638-20959321 (+)
CBA/J	MGP_CBAJ_G0011396	pseudogene	Chr2:22754147-22754594 (+)
DBA/2J	MGP_DBA2J_G0011454	pseudogene	Chr2:20307409-20307856 (+)
FVB/NJ	MGP_FVBNJ_G0011454	pseudogene	Chr2:20071620-20072067 (+)
LP/J	MGP_LPJ_G0011518	pseudogene	Chr2:21226203-21226650 (+)
NOD/ShiLtJ	MGP_NODShiLtJ_G0011453	pseudogene	Chr2:22859273-22859720 (+)
NZO/HlLtJ	MGP_NZOHlLtJ_G0011818	pseudogene	Chr2:21062901-21063348 (+)
PWK/PhJ	MGP_PWKPhJ_G0011081	pseudogene	Chr2:20126194-20126730 (+)
SPRET/EiJ	no annotation
WSB/EiJ	MGP_WSBEiJ_G0011246	pseudogene	Chr2:21167909-21168355 (+)

Homology

• Gene Tree
  Gm13331
  

Expression

• Assay Results
  706

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  21
• RefSeq
  1

• Ensembl
  ENSMUSG00000081519 (Evidence)
• NCBI Gene
  664822

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000081519	Ensembl Gene Model | MGI Sequence Detail	448	C57BL/6J
transcript	ENSMUST00000117500	Ensembl | MGI Sequence Detail	448	Not Applicable

Molecular
Reagents

• 
  

  Microarray probesets 1

References

• Summaries
  All 7
• Earliest
  J:23000 MGD Nomenclature Committee, Nomenclature Committee Use. 1995-02-14;
• Latest
  J:144087 Mouse Genome Informatics Scientific Curators, Mouse Microarray Data Integration in Mouse Genome Informatics, the Affymetrix GeneChip Mouse Genome 430 2.0 Array Platform. Database Download. 2009;