Cyp4a30-ps Pseudogene Detail

Summary

• Symbol
  Cyp4a30-ps
• Name
  cytochrome P450, family 4, subfamily a, member 30, pseudogene
• Synonyms
  Gm12836

• Feature Type
  pseudogene
• IDs
  MGI:3649426
  NCBI Gene: 546842
• Alliance
  gene page

Location &
Maps

• Sequence Map
  Chr4:115200985-115220309 bp, + strand

  From NCBI annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 4, 52.94 cM

Strain
Comparison

• SNPs within 2kb
  34 from dbSNP Build 142
• Strain Annotations
  12

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_3649426	pseudogene	Chr4:115200985-115220312 (+)
129S1/SvImJ	MGP_129S1SvImJ_G0040370	pseudogene	Chr4:116258290-116277814 (+)
A/J	no annotation
AKR/J	MGP_AKRJ_G0040275	pseudogene	Chr4:114150055-114162779 (+)
BALB/cJ	MGP_BALBcJ_G0040349	pseudogene	Chr4:112437640-112452247 (+)
C3H/HeJ	no annotation
C57BL/6NJ	no annotation
CAROLI/EiJ	no annotation
CAST/EiJ	MGP_CASTEiJ_G0039046	pseudogene	Chr4:112985868-113039446 (+)
CBA/J	MGP_CBAJ_G0039939	pseudogene	Chr4:123793434-123953339 (+)
DBA/2J	MGP_DBA2J_G0040145	pseudogene	Chr4:112479787-112497667 (+)
FVB/NJ	MGP_FVBNJ_G0040100	pseudogene	Chr4:110812994-110825072 (+)
LP/J	MGP_LPJ_G0040191	pseudogene	Chr4:116423578-116470697 (+)
NOD/ShiLtJ	no annotation
NZO/HlLtJ	MGP_NZOHlLtJ_G0041043	pseudogene	Chr4:115372839-115402115 (+)
PWK/PhJ	MGP_PWKPhJ_G0038738	pseudogene	Chr4:109111556-109128538 (+)
SPRET/EiJ	MGP_SPRETEiJ_G0038440	pseudogene	Chr4:111669641-111682020 (+)
WSB/EiJ	no annotation

Homology

• Gene Tree
  Cyp4a30-ps
  

Mutations,
Alleles, and
Phenotypes

• Phenotype Summary
  3 phenotype references
  

• All Mutations and Alleles
  3
• Chemically induced (other)
  2
• Radiation induced
  1
• Genomic Mutations
  3 involving Cyp4a30-ps
• Find Mice (IMSR)
  4 strains or lines available

Expression

• Assay Results
  706

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  16
• RefSeq
  1

• Ensembl
  ENSMUSG00000083190 (Evidence)
• NCBI Gene
  546842

Representative Sequences			Length	Strain/Species
genomic	546842	NCBI Gene Model | MGI Sequence Detail	19325	C57BL/6J

References

• Summaries
  All 8

  Phenotypes 3
• Earliest
  J:23389 Roderick TH, Using inversions to detect and study recessive lethals and detrimentals in mice, in Utilization of Mammalian Specific Locus Studies in Hazard Evaluation and Estimation of Genetic Risk. 1983:135-67.
• Latest
  J:109762 Mouse Genome Informatics and VEGA Genome Database Project, Collaboration to Associate VEGA (Vertebrate Genome Annotation) Mouse Gene Models with MGI Markers. Database Release. 2006;