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Zkscan4 Gene Detail
Summary
  • Symbol
    Zkscan4
  • Name
    zinc finger with KRAB and SCAN domains 4
  • Feature Type
    protein coding gene
  • IDs
    MGI:3649412
    NCBI Gene: 544922
  • Alliance
Location &
Maps
more
  • Sequence Map
    Chr13:21478907-21485507 bp, + strand
  • From Ensembl annotation of GRCm38

    View this region in JBrowse

  • Genome Browsers
  • Genetic Map
    Chromosome 13, 7.82 cM
  • Mapping Data
    1 experiment
Strain
Comparison
more
  • SNPs within 2kb
    128 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_3649412
protein coding gene Chr13:21478849-21485507 (+)
129S1/SvImJ MGP_129S1SvImJ_G0020278
protein coding gene Chr13:18743906-18751790 (+)
A/J MGP_AJ_G0020235
protein coding gene Chr13:18334535-18341107 (+)
AKR/J MGP_AKRJ_G0020210
protein coding gene Chr13:18639971-18647288 (+)
BALB/cJ MGP_BALBcJ_G0020223
protein coding gene Chr13:18390318-18396892 (+)
C3H/HeJ MGP_C3HHeJ_G0020023
protein coding gene Chr13:18731091-18737651 (+)
C57BL/6NJ MGP_C57BL6NJ_G0020666
protein coding gene Chr13:19411382-19418990 (+)
CAROLI/EiJ MGP_CAROLIEiJ_G0018274
protein coding gene Chr13:16681200-16687838 (+)
CAST/EiJ MGP_CASTEiJ_G0019561
protein coding gene Chr13:18539400-18545973 (+)
CBA/J MGP_CBAJ_G0019987
protein coding gene Chr13:20079721-20090829 (+)
DBA/2J MGP_DBA2J_G0020109
protein coding gene Chr13:17972144-17979900 (+)
FVB/NJ MGP_FVBNJ_G0020090
protein coding gene Chr13:17637770-17644440 (+)
LP/J MGP_LPJ_G0020179
protein coding gene Chr13:18990154-19001809 (+)
NOD/ShiLtJ MGP_NODShiLtJ_G0020128
protein coding gene Chr13:20467118-20473706 (+)
NZO/HlLtJ MGP_NZOHlLtJ_G0020694
protein coding gene Chr13:18455217-18461744 (+)
PWK/PhJ MGP_PWKPhJ_G0019323
protein coding gene Chr13:18018108-18026138 (+)
SPRET/EiJ MGP_SPRETEiJ_G0019129
protein coding gene Chr13:17468239-17474806 (+)
WSB/EiJ MGP_WSBEiJ_G0019618
protein coding gene Chr13:18537537-18543010 (+)



Homology
more
  • Human Ortholog
    ZKSCAN4, zinc finger with KRAB and SCAN domains 4
  • Vertebrate Orthologs
    2
  • Human Ortholog
    ZKSCAN4, zinc finger with KRAB and SCAN domains 4
    Orthology source: HGNC
  • Synonyms
    P1P373C6, ZNF307, ZNF427, ZSCAN36
  • Links
    NCBI Gene ID: 387032
    neXtProt AC: NX_Q969J2
    UniProt: Q969J2

  • Chr Location
    6p22.1; chr6:28241697-28259312 (-)  GRCh38.p7

Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    8 phenotype references
Expression
less
  • cDNA Data
Interactions
less
Sequences &
Gene Models
less
Representative SequencesLengthStrain/SpeciesFlank
genomic ENSMUSG00000054931 Ensembl Gene Model | MGI Sequence Detail 6601 C57BL/6J ±  kb
transcript ENSMUST00000062609 Ensembl | MGI Sequence Detail 2400 Not Applicable  
polypeptide ENSMUSP00000054604 Ensembl | MGI Sequence Detail 480 Not Applicable  
For the selected sequence
Protein
Information
less
Molecular
Reagents
less
  • All nucleic 4
    Genomic 1
    cDNA 3

    Microarray probesets 3
Other
Accession IDs
less
MGI:2145290
References
more
  • Summaries
    All 24
    Phenotypes 8
  • Earliest
    J:182573 Roderick TH, Producing and detecting paracentric chromosomal inversions in mice. Mutat Res. 1971 Jan;11(1):59-69
  • Latest
    J:153498 Diez-Roux G, et al., A high-resolution anatomical atlas of the transcriptome in the mouse embryo. PLoS Biol. 2011;9(1):e1000582

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB), Gene Ontology (GO)
Citing These Resources
Funding Information
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last database update
09/10/2019
MGI 6.14
The Jackson Laboratory