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Cox5b-ps Gene Detail
Summary
  • Symbol
    Cox5b-ps
  • Name
    cytochrome c oxidase subunit 5B, pseudogene
  • Synonyms
    Gm11273
Location &
Maps
more
  • Sequence Map
    Chr13:21685120-21685616 bp, - strand
    From Ensembl annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
    Ensembl | UCSC | NCBI
  • Genetic Map
    Chromosome 13, 7.83 cM
Strain
Comparison
more
  • SNPs within 2kb
    4 from dbSNP Build 142
  • Strain Annotations
    17
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_3649411
 protein coding gene Chr13:21685105-21685622 (-)
129S1/SvImJ MGP_129S1SvImJ_G0034233
 protein coding gene Chr8:126147085-126147409 (+)
A/J MGP_AJ_G0034213
 protein coding gene Chr8:120918890-120919259 (+)
AKR/J MGP_AKRJ_G0034140
 protein coding gene Chr8:124443978-124444302 (+)
BALB/cJ MGP_BALBcJ_G0034207
 protein coding gene Chr8:121118382-121118706 (+)
C3H/HeJ MGP_C3HHeJ_G0020025
 protein coding gene Chr13:18753760-18756090 (-)
C57BL/6NJ MGP_C57BL6NJ_G0020667
 protein coding gene Chr13:19436423-19436812 (-)
CAROLI/EiJ MGP_CAROLIEiJ_G0018785
 protein coding gene Chr13:87684607-87684931 (+)
CAST/EiJ MGP_CASTEiJ_G0033245
 protein coding gene Chr8:125226014-125226338 (+)
CBA/J MGP_CBAJ_G0019989
 protein coding gene Chr13:20106369-20106781 (+)
DBA/2J MGP_DBA2J_G0034047
 protein coding gene Chr8:120107427-120107751 (+)
FVB/NJ MGP_FVBNJ_G0033990
 protein coding gene Chr8:119253497-119253821 (+)
LP/J MGP_LPJ_G0034136
 protein coding gene Chr8:126266744-126267068 (+)
NOD/ShiLtJ MGP_NODShiLtJ_G0034037
 protein coding gene Chr8:137308676-137309000 (+)
NZO/HlLtJ MGP_NZOHlLtJ_G0034745
 protein coding gene Chr8:124626903-124627498 (+)
PWK/PhJ no annotation
SPRET/EiJ MGP_SPRETEiJ_G0020446
 protein coding gene Chr14:76609054-76609378 (+)
WSB/EiJ MGP_WSBEiJ_G0033361
 protein coding gene Chr8:125382413-125382737 (+)



Homology
less
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    8 phenotype references
  • All Mutations and Alleles
    2
  • Chemically induced (other)
    1
  • Radiation induced
    1
  • Genomic Mutations
    2 involving Cox5b-ps
  • Find Mice (IMSR)
    5 strains or lines available
Gene Ontology
(GO)
Classifications
less
Molecular Function

No experimental evidence to support Molecular Function annotation, following literature review. See J:73796.
Biological Process

No experimental evidence to support Biological Process annotation, following literature review. See J:73796.
Cellular Component

No experimental evidence to support Cellular Component annotation, following literature review. See J:73796.
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
    800
  • Tissues
    94
  • Literature Summary
    1
Sequences &
Gene Models
less
  • All Sequences
    24
  • RefSeq
    1
Representative SequencesLengthStrain/SpeciesFlank
genomic ENSMUSG00000079941 Ensembl Gene Model | MGI Sequence Detail 497 C57BL/6J ±  kb
transcript ENSMUST00000044043 Ensembl | MGI Sequence Detail 497 Not Applicable  
polypeptide ENSMUSP00000038961 Ensembl | MGI Sequence Detail 129 Not Applicable  
For the selected sequence
Molecular
Reagents
less
  • All nucleic 2
    Genomic 1
    cDNA 1
References
more
  • Summaries
    All 17
    Developmental Gene Expression 1
    Phenotypes 8
  • Earliest
    J:182573 Roderick TH, Producing and detecting paracentric chromosomal inversions in mice. Mutat Res. 1971 Jan;11(1):59-69
  • Latest
    J:141688 Goldsworthy M, et al., Role of the transcription factor sox4 in insulin secretion and impaired glucose tolerance. Diabetes. 2008 Aug;57(8):2234-44
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
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Send questions and comments to User Support. 		last database update
04/16/2024
MGI 6.23 		The Jackson Laboratory