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Gm12870 Pseudogene Detail
Summary
  • Symbol
    Gm12870
  • Name
    predicted gene 12870
  • Synonyms
    EG652920
  • Feature Type
    pseudogene
  • IDs
    MGI:3649408
    NCBI Gene: 652920
  • Alliance
    gene page
Location &
Maps
more
  • Sequence Map
    Chr4:107184681-107185696 bp, - strand
    From Ensembl annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
    Ensembl | UCSC | NCBI
  • Genetic Map
    Chromosome 4, 50.18 cM
  • Mapping Data
    1 experiment
Strain
Comparison
more
  • SNPs within 2kb
    39 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_3649408
 pseudogene Chr4:107184021-107185726 (-)
129S1/SvImJ MGP_129S1SvImJ_G0012809
 pseudogene Chr4:108015384-108016394 (-)
A/J MGP_AJ_G0012794
 pseudogene Chr4:104139056-104140066 (-)
AKR/J MGP_AKRJ_G0012764
 pseudogene Chr4:106702088-106703103 (-)
BALB/cJ MGP_BALBcJ_G0012775
 pseudogene Chr4:104332080-104333095 (-)
C3H/HeJ MGP_C3HHeJ_G0012631
 pseudogene Chr4:107438714-107439729 (-)
C57BL/6NJ MGP_C57BL6NJ_G0013105
 pseudogene Chr4:111889009-111890024 (-)
CAROLI/EiJ MGP_CAROLIEiJ_G0011381
 pseudogene Chr4:99421349-99422363 (-)
CAST/EiJ MGP_CASTEiJ_G0012383
 pseudogene Chr4:105257468-105258483 (-)
CBA/J MGP_CBAJ_G0012607
 pseudogene Chr4:115522377-115523392 (-)
DBA/2J MGP_DBA2J_G0012670
 pseudogene Chr4:103762036-103763051 (-)
FVB/NJ MGP_FVBNJ_G0012673
 pseudogene Chr4:102628878-102629888 (-)
LP/J MGP_LPJ_G0012744
 pseudogene Chr4:108206423-108207433 (-)
NOD/ShiLtJ MGP_NODShiLtJ_G0012683
 pseudogene Chr4:120809463-120810478 (-)
NZO/HlLtJ MGP_NZOHlLtJ_G0013116
 pseudogene Chr4:106929493-106930625 (-)
PWK/PhJ MGP_PWKPhJ_G0012206
 pseudogene Chr4:102008118-102009223 (-)
SPRET/EiJ MGP_SPRETEiJ_G0012014
 pseudogene Chr4:104323421-104324377 (-)
WSB/EiJ MGP_WSBEiJ_G0012411
 pseudogene Chr4:107109930-107110945 (-)



Homology
less
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    3 phenotype references
  • All Mutations and Alleles
    3
  • Chemically induced (other)
    2
  • Radiation induced
    1
  • Genomic Mutations
    3 involving Gm12870
  • Find Mice (IMSR)
    0 strains or lines available
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
    706
Sequences &
Gene Models
less
  • All Sequences
    22
  • RefSeq
    1
Representative SequencesLengthStrain/SpeciesFlank
genomic ENSMUSG00000082279 Ensembl Gene Model | MGI Sequence Detail 1016 C57BL/6J ±  kb
transcript ENSMUST00000121383 Ensembl | MGI Sequence Detail 1016 Not Applicable  
For the selected sequence
Other
Accession IDs
less
MGI:3648116
References
more
  • Summaries
    All 9
    Phenotypes 3
  • Earliest
    J:23389 Roderick TH, Using inversions to detect and study recessive lethals and detrimentals in mice, in Utilization of Mammalian Specific Locus Studies in Hazard Evaluation and Estimation of Genetic Risk. 1983:135-67.
  • Latest
    J:109762 Mouse Genome Informatics and VEGA Genome Database Project, Collaboration to Associate VEGA (Vertebrate Genome Annotation) Mouse Gene Models with MGI Markers. Database Release. 2006;
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
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Send questions and comments to User Support. 		last database update
04/16/2024
MGI 6.23 		The Jackson Laboratory