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Trav18 Gene Detail
Summary
  • Symbol
    Trav18
  • Name
    T cell receptor alpha variable 18
  • Feature Type
    gene segment
  • IDs
    MGI:3649382
    NCBI Gene: 547427
  • Alliance
Location &
Maps
more
  • Sequence Map
    Chr14:53831105-53831827 bp, + strand
  • From NCBI annotation of GRCm38

    View this region in JBrowse

  • Genome Browsers
  • Genetic Map
    Chromosome 14, 27.53 cM
Strain
Comparison
more
  • SNPs within 2kb
    43 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_3649382
gene segment Chr14:53831105-53831827 (+)
129S1/SvImJ MGP_129S1SvImJ_G0002567
gene segment Chr14:47751404-47752129 (+)
A/J MGP_AJ_G0002538
gene segment Chr14:46855892-46856617 (+)
AKR/J MGP_AKRJ_G0002529
gene segment Chr14:48545429-48546154 (+)
BALB/cJ MGP_BALBcJ_G0002524
gene segment Chr14:46820891-46821616 (+)
C3H/HeJ MGP_C3HHeJ_G0002491
gene segment Chr14:48221448-48222173 (+)
C57BL/6NJ MGP_C57BL6NJ_G0002665
gene segment Chr14:50191692-50192414 (+)
CAROLI/EiJ MGP_CAROLIEiJ_G0002235
gene segment Chr14:45290256-45290981 (+)
CAST/EiJ MGP_CASTEiJ_G0002477
gene segment Chr14:44472848-44473570 (+)
CBA/J MGP_CBAJ_G0002490
gene segment Chr14:51672464-51673189 (+)
DBA/2J MGP_DBA2J_G0002494
gene segment Chr14:46576869-46577594 (+)
FVB/NJ MGP_FVBNJ_G0002522
gene segment Chr14:46061028-46061753 (+)
LP/J MGP_LPJ_G0002573
gene segment Chr14:48776891-48777616 (+)
NOD/ShiLtJ MGP_NODShiLtJ_G0002497
gene segment Chr14:51118456-51119181 (+)
NZO/HlLtJ MGP_NZOHlLtJ_G0002675
gene segment Chr14:47730466-47731191 (+)
PWK/PhJ MGP_PWKPhJ_G0002436
gene segment Chr14:43127354-43128079 (+)
SPRET/EiJ MGP_SPRETEiJ_G0002388
gene segment Chr14:43705931-43706656 (+)
WSB/EiJ MGP_WSBEiJ_G0002492
gene segment Chr14:48036219-48036944 (+)



Homology
less
Expression
less
Sequences &
Gene Models
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  • All Sequences
  • RefSeq
  • UniProt
Representative SequencesLengthStrain/SpeciesFlank
genomic 547427 NCBI Gene Model | MGI Sequence Detail 723 C57BL/6J ±  kb
polypeptide A0A075B656 UniProt | EBI | MGI Sequence Detail 109 Not Applicable  
For the selected sequence
Protein
Information
less
  • UniProt
    2 Sequences
  • InterPro Domains
    IPR007110 Immunoglobulin-like domain
    IPR036179 Immunoglobulin-like domain superfamily
    IPR013783 Immunoglobulin-like fold
    IPR013106 Immunoglobulin V-set domain
Molecular
Reagents
less

  • Microarray probesets 1
References
more
  • Summaries
    All 8
  • Earliest
    J:164272 Giudicelli V, et al., IMGT/GENE-DB: a comprehensive database for human and mouse immunoglobulin and T cell receptor genes. Nucleic Acids Res. 2005 Jan 1;33(Database issue):D256-61

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB), Gene Ontology (GO)
Citing These Resources
Funding Information
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last database update
12/03/2019
MGI 6.14
The Jackson Laboratory