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Gm12642 Pseudogene Detail
Summary
  • Symbol
    Gm12642
  • Name
    predicted gene 12642
  • Feature Type
    pseudogene
  • IDs
    MGI:3649275
    NCBI Gene: 384125
  • Alliance
    gene page
Location &
Maps
more
  • Sequence Map
    Chr4:93153650-93154525 bp, - strand
    From Ensembl annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
    Ensembl | UCSC | NCBI
  • Genetic Map
    Chromosome 4, 43.24 cM
Strain
Comparison
more
  • SNPs within 2kb
    82 from dbSNP Build 142
  • Strain Annotations
    17
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_3649275
 pseudogene Chr4:93153469-93154613 (-)
129S1/SvImJ MGP_129S1SvImJ_G0012765
 pseudogene Chr4:93263504-93264393 (-)
A/J MGP_AJ_G0012751
 pseudogene Chr4:90045030-90045905 (-)
AKR/J MGP_AKRJ_G0012723
 pseudogene Chr4:92169981-92170856 (-)
BALB/cJ MGP_BALBcJ_G0012732
 pseudogene Chr4:90290645-90291520 (-)
C3H/HeJ MGP_C3HHeJ_G0012591
 pseudogene Chr4:93020524-93021399 (-)
C57BL/6NJ MGP_C57BL6NJ_G0013063
 pseudogene Chr4:96859206-96860081 (-)
CAROLI/EiJ no annotation
CAST/EiJ MGP_CASTEiJ_G0012343
 pseudogene Chr4:90867467-90868344 (-)
CBA/J MGP_CBAJ_G0012567
 pseudogene Chr4:99816286-99817161 (-)
DBA/2J MGP_DBA2J_G0012629
 pseudogene Chr4:89802534-89803409 (-)
FVB/NJ MGP_FVBNJ_G0012632
 pseudogene Chr4:88678081-88678956 (-)
LP/J MGP_LPJ_G0012702
 pseudogene Chr4:93584604-93585493 (-)
NOD/ShiLtJ MGP_NODShiLtJ_G0012641
 pseudogene Chr4:105471968-105472843 (-)
NZO/HlLtJ MGP_NZOHlLtJ_G0013070
 pseudogene Chr4:92439331-92440206 (-)
PWK/PhJ MGP_PWKPhJ_G0012166
 pseudogene Chr4:87987309-87988198 (-)
SPRET/EiJ MGP_SPRETEiJ_G0011975
 pseudogene Chr4:89858855-89859729 (-)
WSB/EiJ MGP_WSBEiJ_G0012370
 pseudogene Chr4:92596268-92597143 (-)



Homology
less
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    4 phenotype references
  • All Mutations and Alleles
    4
  • Chemically induced (other)
    2
  • Endonuclease-mediated
    1
  • Radiation induced
    1
  • Genomic Mutations
    4 involving Gm12642
  • Find Mice (IMSR)
    0 strains or lines available
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
    706
Sequences &
Gene Models
less
  • All Sequences
    21
  • RefSeq
    1
Representative SequencesLengthStrain/SpeciesFlank
genomic ENSMUSG00000082325 Ensembl Gene Model | MGI Sequence Detail 876 C57BL/6J ±  kb
transcript ENSMUST00000121098 Ensembl | MGI Sequence Detail 876 Not Applicable  
For the selected sequence
References
more
  • Summaries
    All 9
    Phenotypes 4
  • Earliest
    J:235276 Saito M, et al., Identification of Stmm3 locus conferring resistance to late-stage chemically induced skin papillomas on mouse chromosome 4 by congenic mapping and allele-specific alteration analysis. Exp Anim. 2014;63(3):339-48
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
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Send questions and comments to User Support. 		last database update
04/16/2024
MGI 6.23 		The Jackson Laboratory