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Tgif2-ps1 Pseudogene Detail
Summary
  • Symbol
    Tgif2-ps1
  • Name
    TGFB-induced factor homeobox 2, pseudogene 1
  • Synonyms
    Gm12605
  • Feature Type
    pseudogene
  • IDs
    MGI:3649223
    NCBI Gene: 625574
  • Alliance
Location &
Maps
more
  • Sequence Map
    Chr4:89216864-89217816 bp, + strand
  • From Ensembl annotation of GRCm38

    View this region in JBrowse

  • Genome Browsers
  • Genetic Map
    Chromosome 4, 42.15 cM
Strain
Comparison
more
  • SNPs within 2kb
    8 from dbSNP Build 142
  • Strain Annotations
    17
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_3649223
pseudogene Chr4:89216711-89218488 (+)
129S1/SvImJ MGP_129S1SvImJ_G0012752
pseudogene Chr4:89163637-89166800 (+)
A/J MGP_AJ_G0011939
pseudogene Chr2:155331039-155340498 (+)
AKR/J MGP_AKRJ_G0011904
pseudogene Chr2:159848801-159864407 (+)
BALB/cJ MGP_BALBcJ_G0011917
pseudogene Chr2:155620209-155629670 (+)
C3H/HeJ MGP_C3HHeJ_G0011796
pseudogene Chr2:160188396-160202690 (+)
C57BL/6NJ no annotation
CAROLI/EiJ MGP_CAROLIEiJ_G0010683
pseudogene Chr2:148790758-148799515 (+)
CAST/EiJ MGP_CASTEiJ_G0011582
pseudogene Chr2:160530045-160539471 (+)
CBA/J MGP_CBAJ_G0011770
pseudogene Chr2:172570281-172582036 (+)
DBA/2J MGP_DBA2J_G0011824
pseudogene Chr2:154501496-154513131 (+)
FVB/NJ MGP_FVBNJ_G0011831
pseudogene Chr2:152871051-152885919 (+)
LP/J MGP_LPJ_G0012689
pseudogene Chr4:89445792-89452834 (+)
NOD/ShiLtJ MGP_NODShiLtJ_G0011829
pseudogene Chr2:176449891-176463216 (+)
NZO/HlLtJ MGP_NZOHlLtJ_G0012216
pseudogene Chr2:159706492-159715964 (+)
PWK/PhJ MGP_PWKPhJ_G0011431
pseudogene Chr2:154009456-154019366 (+)
SPRET/EiJ MGP_SPRETEiJ_G0011247
pseudogene Chr2:158649771-158659202 (+)
WSB/EiJ MGP_WSBEiJ_G0011602
pseudogene Chr2:160598399-160607853 (+)



Homology
less
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    3 phenotype references
  • All Mutations and Alleles
    3
  • Chemically induced (other)
    2
  • Radiation induced
    1
  • Genomic Mutations
    3 involving Tgif2-ps1
  • Find Mice (IMSR)
Expression
less
Sequences &
Gene Models
less
  • All Sequences
  • RefSeq
Representative SequencesLengthStrain/SpeciesFlank
genomic ENSMUSG00000107513 Ensembl Gene Model | MGI Sequence Detail 953 C57BL/6J ±  kb
transcript ENSMUST00000203590 Ensembl | MGI Sequence Detail 713 Not Applicable  
For the selected sequence
References
more
  • Summaries
    All 8
    Phenotypes 3
  • Earliest
    J:23389 Roderick TH, Using inversions to detect and study recessive lethals and detrimentals in mice, in Utilization of Mammalian Specific Locus Studies in Hazard Evaluation and Estimation of Genetic Risk. 1983:135-67.
  • Latest
    J:109762 Mouse Genome Informatics and VEGA Genome Database Project, Collaboration to Associate VEGA (Vertebrate Genome Annotation) Mouse Gene Models with MGI Markers. Database Release. 2006;

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB), Gene Ontology (GO)
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Funding Information
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last database update
12/03/2019
MGI 6.14
The Jackson Laboratory