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Gm12796 Gene Detail
Summary
  • Symbol
    Gm12796
  • Name
    predicted gene 12796
  • Feature Type
    lncRNA gene
  • IDs
    MGI:3649207
    NCBI Gene: 115489887
  • Alliance
    gene page
  • Transcription Start Sites
    1 TSS
Location &
Maps
more
  • Sequence Map
    Chr4:101148885-101152883 bp, - strand
    From NCBI annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
    Ensembl | UCSC | NCBI
  • Genetic Map
    Chromosome 4, 46.53 cM
Strain
Comparison
more
  • SNPs within 2kb
    45 from dbSNP Build 142
  • Strain Annotations
    17
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_3649207
 lncRNA gene Chr4:101148885-101178942 (-)
129S1/SvImJ MGP_129S1SvImJ_G0006475
 lincRNA gene Chr4:101588756-101619751 (-)
A/J MGP_AJ_G0006467
 lincRNA gene Chr4:98039438-98069717 (-)
AKR/J MGP_AKRJ_G0006441
 lincRNA gene Chr4:100410167-100445456 (-)
BALB/cJ MGP_BALBcJ_G0006441
 lincRNA gene Chr4:98241032-98270735 (-)
C3H/HeJ MGP_C3HHeJ_G0006391
 lincRNA gene Chr4:101211096-101239766 (-)
C57BL/6NJ MGP_C57BL6NJ_G0006607
 lincRNA gene Chr4:105426820-105457368 (-)
CAROLI/EiJ no annotation
CAST/EiJ MGP_CASTEiJ_G0006324
 lincRNA gene Chr4:98996309-99030794 (-)
CBA/J MGP_CBAJ_G0006374
 lincRNA gene Chr4:108744310-108773385 (-)
DBA/2J MGP_DBA2J_G0006396
 lincRNA gene Chr4:97739202-97767233 (-)
FVB/NJ MGP_FVBNJ_G0006418
 lincRNA gene Chr4:96571870-96601394 (-)
LP/J MGP_LPJ_G0006477
 lincRNA gene Chr4:101888380-101918599 (-)
NOD/ShiLtJ MGP_NODShiLtJ_G0006405
 lincRNA gene Chr4:114285959-114315318 (-)
NZO/HlLtJ MGP_NZOHlLtJ_G0006611
 lincRNA gene Chr4:100665365-100696429 (-)
PWK/PhJ MGP_PWKPhJ_G0006261
 lincRNA gene Chr4:95904880-95933675 (-)
SPRET/EiJ MGP_SPRETEiJ_G0006172
 lincRNA gene Chr4:98115730-98143289 (-)
WSB/EiJ MGP_WSBEiJ_G0006370
 lincRNA gene Chr4:100829269-100859024 (-)



Homology
less
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    6 phenotype references
  • All Mutations and Alleles
    4
  • Chemically induced (other)
    2
  • Radiation induced
    1
  • Targeted
    1
  • Genomic Mutations
    4 involving Gm12796
  • Find Mice (IMSR)
    1 strains or lines available
Gene Ontology
(GO)
Classifications
less
Molecular Function

No experimental evidence to support Molecular Function annotation, following literature review. See J:73796.
Biological Process

No experimental evidence to support Biological Process annotation, following literature review. See J:73796.
Cellular Component

No experimental evidence to support Cellular Component annotation, following literature review. See J:73796.
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
    706
Sequences &
Gene Models
less
  • All Sequences
    22
  • RefSeq
    1
Representative SequencesLengthStrain/SpeciesFlank
genomic 115489887 NCBI Gene Model | MGI Sequence Detail 3999 C57BL/6J ±  kb
transcript XR_003955080 RefSeq | MGI Sequence Detail 3435 C57BL/6J  
For the selected sequence
References
more
  • Summaries
    All 12
    Phenotypes 6
  • Earliest
    J:84714 Nishijima I, et al., Two new balancer chromosomes on mouse chromosome 4 to facilitate functional annotation of human chromosome 1p. Genesis. 2003 Jul;36(3):142-8
  • Latest
    J:148802 Boles MK, et al., A mouse chromosome 4 balancer ENU-mutagenesis screen isolates eleven lethal lines. BMC Genet. 2009;10:12
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
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Send questions and comments to User Support. 		last database update
04/16/2024
MGI 6.23 		The Jackson Laboratory