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Gm6525 Gene Detail
Summary
  • Symbol
    Gm6525
  • Name
    predicted pseudogene 6525
Location &
Maps
more
  • Sequence Map
    Chr3:84174638-84175193 bp, + strand
  • From NCBI annotation of GRCm38

    View this region in JBrowse

  • Genome Browsers
  • Genetic Map
    Chromosome 3, 37.49 cM
  • Mapping Data
    1 experiment
Strain
Comparison
more
  • SNPs within 2kb
    16 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_3648757
protein coding gene Chr3:84174104-84175193 (.)
129S1/SvImJ MGP_129S1SvImJ_G0027341
protein coding gene Chr3:84073284-84074311 (+)
A/J MGP_AJ_G0027305
protein coding gene Chr3:81285055-81286084 (+)
AKR/J MGP_AKRJ_G0027271
protein coding gene Chr3:83201405-83202432 (+)
BALB/cJ MGP_BALBcJ_G0027314
protein coding gene Chr3:81357504-81358531 (+)
C3H/HeJ MGP_C3HHeJ_G0027058
protein coding gene Chr3:83516512-83517540 (+)
C57BL/6NJ MGP_C57BL6NJ_G0027760
protein coding gene Chr3:87210905-87211933 (+)
CAROLI/EiJ MGP_CAROLIEiJ_G0025113
protein coding gene Chr3:76955968-76957181 (+)
CAST/EiJ MGP_CASTEiJ_G0026505
protein coding gene Chr3:83686666-83687687 (+)
CBA/J MGP_CBAJ_G0027033
protein coding gene Chr3:90142715-90143743 (+)
DBA/2J MGP_DBA2J_G0027169
protein coding gene Chr3:80806050-80807077 (+)
FVB/NJ MGP_FVBNJ_G0027137
protein coding gene Chr3:79088066-79089093 (+)
LP/J MGP_LPJ_G0027277
protein coding gene Chr3:85049089-85050116 (+)
NOD/ShiLtJ MGP_NODShiLtJ_G0027156
protein coding gene Chr3:96508835-96509862 (+)
NZO/HlLtJ MGP_NZOHlLtJ_G0027818
protein coding gene Chr3:83000544-83001571 (+)
PWK/PhJ MGP_PWKPhJ_G0026239
protein coding gene Chr3:80571047-80572063 (+)
SPRET/EiJ MGP_SPRETEiJ_G0026055
protein coding gene Chr3:82174792-82176131 (+)
WSB/EiJ MGP_WSBEiJ_G0026583
protein coding gene Chr3:83354494-83355521 (+)



Homology
less
Human Diseases
less
  • References
    1 with disease annotations
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    3 phenotype references
  • All Mutations and Alleles
    2
  • Chemically induced (other)
    1
  • Radiation induced
    1
  • Genomic Mutations
    2 involving Gm6525
  • Find Mice (IMSR)
Gene Ontology
(GO)
Classifications
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  • All GO Annotations
  • GO References
Molecular Function

carbohydrate derivative binding
cytoskeletal protein binding
DNA binding
enzyme regulator
hydrolase
ligase
lipid binding
oxidoreductase
RNA binding
signaling receptor activity
signaling receptor binding
transcription
transferase
transporter
Biological Process

carbohydrate derivative metabolism
cell death
cell differentiation
cell proliferation
cellular component organization
establishment of localization
homeostatic process
immune system process
lipid metabolic process
nucleic acid-templated transcription
protein metabolic process
response to stimulus
signaling
system development
Cellular Component

cell projection
cytoplasmic vesicle
cytoskeleton
cytosol
endoplasmic reticulum
endosome
extracellular region
Golgi apparatus
mitochondrion
non-membrane-bounded organelle
nucleus
organelle envelope
organelle lumen
plasma membrane
synapse
vacuole
Click cells to view annotations.
Expression
less
  • cDNA Data
Sequences &
Gene Models
less
  • All Sequences
  • RefSeq
  • UniProt
  • UniGene
Representative SequencesLengthStrain/SpeciesFlank
genomic 624713 NCBI Gene Model | MGI Sequence Detail 556 C57BL/6J ±  kb
transcript NR_036654 RefSeq | MGI Sequence Detail 556 C57BL/6  
polypeptide A0A0A6YW33 UniProt | EBI | MGI Sequence Detail 106 Not Applicable  
For the selected sequence
Protein
Information
less
  • UniProt
    1 Sequence
  • InterPro Domains
    IPR000552 Ribosomal protein L44e
    IPR011332 Zinc-binding ribosomal protein
Molecular
Reagents
less
  • All nucleic 1
    cDNA 1
References
more
  • Summaries
    All 12
    Diseases 1
    Gene Ontology 2
    Phenotypes 3
  • Earliest
    J:70677 Cook SA, et al., Mouse paracentric inversion In(3)55Rk mutates the urate oxidase gene. Cytogenet Cell Genet. 2001;93(1-2):77-82
  • Latest
    J:265628 Gaudet P, et al., Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. Brief Bioinform. 2011 Sep;12(5):449-62

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
Citing These Resources
Funding Information
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last database update
11/06/2018
MGI 6.13
The Jackson Laboratory