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Gm5885 Pseudogene Detail
Summary
  • Symbol
    Gm5885
  • Name
    predicted gene 5885
Location &
Maps
more
  • Sequence Map
    Chr6:133506152-133509725 bp, + strand
    From NCBI annotation of GRCm39
  • View this region in JBrowse

  • Genome Browsers
  • Genetic Map
    Chromosome 6, 64.03 cM
  • Mapping Data
    1 experiment
Strain
Comparison
more
  • SNPs within 2kb
    52 from dbSNP Build 142
  • Strain Annotations
    16
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_3648672
pseudogene Chr6:133506152-133509725 (+)
129S1/SvImJ MGP_129S1SvImJ_G0039843
pseudogene Chr6:137772561-137776131 (+)
A/J MGP_AJ_G0039845
pseudogene Chr6:132103768-132107338 (+)
AKR/J MGP_AKRJ_G0039772
pseudogene Chr6:136221507-136225075 (+)
BALB/cJ MGP_BALBcJ_G0039818
pseudogene Chr6:131659392-131662961 (+)
C3H/HeJ MGP_C3HHeJ_G0039472
pseudogene Chr6:136384867-136388436 (+)
C57BL/6NJ MGP_C57BL6NJ_G0040389
pseudogene Chr6:141235273-141238848 (+)
CAROLI/EiJ MGP_CAROLIEiJ_G0036984
pseudogene Chr6:130838138-130841686 (+)
CAST/EiJ no annotation
CBA/J MGP_CBAJ_G0039441
pseudogene Chr6:146742210-146745786 (+)
DBA/2J MGP_DBA2J_G0039642
pseudogene Chr6:131192266-131195837 (+)
FVB/NJ MGP_FVBNJ_G0039600
pseudogene Chr6:130163111-130166681 (+)
LP/J MGP_LPJ_G0039678
pseudogene Chr6:137643576-137647143 (+)
NOD/ShiLtJ MGP_NODShiLtJ_G0039596
pseudogene Chr6:150614595-150616900 (+)
NZO/HlLtJ no annotation
PWK/PhJ MGP_PWKPhJ_G0038257
pseudogene Chr6:129573218-129575519 (+)
SPRET/EiJ MGP_SPRETEiJ_G0038002
pseudogene Chr6:134338172-134340480 (+)
WSB/EiJ MGP_WSBEiJ_G0038811
pseudogene Chr6:136509999-136512302 (+)



Homology
less
Mutations,
Alleles, and
Phenotypes
less
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
  • cDNA Data
Interactions
less
Sequences &
Gene Models
less
  • All Sequences
  • RefSeq
Representative SequencesLengthStrain/SpeciesFlank
genomic 545884 NCBI Gene Model | MGI Sequence Detail 3574 C57BL/6J ±  kb
transcript NM_001185040 RefSeq | MGI Sequence Detail 648 C57BL/6  
polypeptide NP_001171969 RefSeq | MGI Sequence Detail 174 C57BL/6  
For the selected sequence
Molecular
Reagents
less
  • All nucleic 1
    cDNA 1
References
more
  • Summaries
    All 5
  • Earliest
    J:23000 MGD Nomenclature Committee, Nomenclature Committee Use. 1995-02-14;
  • Latest
    J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
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last database update
11/22/2022
MGI 6.22
The Jackson Laboratory