Tmem267 Gene Detail

Summary

• Symbol
  Tmem267
• Name
  transmembrane protein 267
• Synonyms
  Gm7120

• Feature Type
  protein coding gene
• IDs
  MGI:3648543
  NCBI Gene: 633640
• Alliance
  gene page
• Transcription Start Sites
  6 TSS

Location &
Maps

• Sequence Map
  Chr13:119624622-120071995 bp, + strand

  From NCBI annotation of GRCm39
  

• View this region in JBrowse
  
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 13, 67.25 cM
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  93 from dbSNP Build 142
• Strain Annotations
  17

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_3648543	protein coding gene	Chr13:119624575-120072595 (+)
129S1/SvImJ	MGP_129S1SvImJ_G0020973	protein coding gene	Chr13:122513084-122520926 (+)
A/J	MGP_AJ_G0020923	protein coding gene	Chr13:117666188-117669261 (+)
AKR/J	MGP_AKRJ_G0020898	protein coding gene	Chr13:121027376-121037339 (+)
BALB/cJ	MGP_BALBcJ_G0020923	protein coding gene	Chr13:118222518-118229657 (+)
C3H/HeJ	MGP_C3HHeJ_G0020712	protein coding gene	Chr13:120842346-120973045 (+)
C57BL/6NJ	MGP_C57BL6NJ_G0021359	protein coding gene	Chr13:126086874-126102232 (+)
CAROLI/EiJ	MGP_CAROLIEiJ_G0018928	protein coding gene	Chr13:112527891-112536121 (+)
CAST/EiJ	MGP_CASTEiJ_G0020231	protein coding gene	Chr13:120704789-120713083 (+)
CBA/J	MGP_CBAJ_G0020674	protein coding gene	Chr13:130930724-130943408 (+)
DBA/2J	MGP_DBA2J_G0020797	protein coding gene	Chr13:117157997-117168948 (+)
FVB/NJ	MGP_FVBNJ_G0020781	protein coding gene	Chr13:115761986-115765228 (+)
LP/J	MGP_LPJ_G0020873	protein coding gene	Chr13:122476987-122599510 (+)
NOD/ShiLtJ	no annotation
NZO/HlLtJ	MGP_NZOHlLtJ_G0021395	protein coding gene	Chr13:120533880-120541353 (+)
PWK/PhJ	MGP_PWKPhJ_G0019984	protein coding gene	Chr13:116044099-116052785 (+)
SPRET/EiJ	MGP_SPRETEiJ_G0019807	protein coding gene	Chr13:116907066-116915247 (+)
WSB/EiJ	MGP_WSBEiJ_G0020290	protein coding gene	Chr13:121340205-121342548 (+)

Homology

• Human Ortholog
  TMEM267, transmembrane protein 267

• Vertebrate Orthologs
  3

Vertebrate Orthology Source

Alliance of Genome Resources

• Human Ortholog
  TMEM267, transmembrane protein 267
  
• Synonyms
  C5orf28
• Links
  HGNC:26139

  NCBI Gene ID: 64417

  neXtProt AC: NX_Q0VDI3

  UniProt: Q0VDI3

  
  
• Chr Location
  5p12; chr5:43444252-43484660 (-)  GRCh38.p7

---

• Alliance of Genome Resources
  Tmem267 stringent orthology
  1 human;1 mouse;1 rat;1 zebrafish
  
• HCOP
  vertebrate homology predictions: TMEM267
• Gene Tree
  Tmem267
  

Mutations,
Alleles, and
Phenotypes

• Phenotype Summary
  2 phenotype references
  

• All Mutations and Alleles
  2
• Gene trapped
  2
• Incidental Mutations
  CvDC
• Find Mice (IMSR)
  5 strains or lines available

Gene Ontology
(GO)
Classifications

• All GO Annotations
  2
• GO References
  1

Expression

• Assay Results
  672
• cDNA Data
  24

Tissue x Stage Matrix

• Other Mouse Links
  Allen Institute
  GEO
  Expression Atlas
• Other Vertebrate Links
  ZFIN tmem267

Interactions

• Tmem267 interacts with 313 markers (Mir1b, Mir7-1, Mir7-2, ...) View All

Sequences &
Gene Models

• All Sequences
  43
• RefSeq
  8
• UniProt
  2
• CCDS
  CCDS56899.1

• Ensembl
  ENSMUSG00000074634 (Evidence)
• NCBI Gene
  633640

Representative Sequences			Length	Strain/Species
genomic	633640	NCBI Gene Model | MGI Sequence Detail	447374	C57BL/6J
transcript	NM_001370627	RefSeq | MGI Sequence Detail	2276	C57BL/6
polypeptide	Q8VDR5	UniProt | EBI | MGI Sequence Detail	215	Not Applicable

Protein
Information

• UniProt
  2 Sequences
• Protein Ontology
  PR:000059777 transmembrane protein 267
  (term hierarchy)
• InterPro Domains
  IPR026572 Transmembrane protein 267

Molecular
Reagents

• All nucleic 24

  cDNA 24

  
  

  Microarray probesets 1

References

• Summaries
  All 17

  Gene Ontology 1

  Phenotypes 2
• Earliest
  J:142754 Hansen GM, et al., Large-scale gene trapping in C57BL/6N mouse embryonic stem cells. Genome Res. 2008 Oct;18(10):1670-9
• Latest
  J:153498 Diez-Roux G, et al., A high-resolution anatomical atlas of the transcriptome in the mouse embryo. PLoS Biol. 2011;9(1):e1000582

TSS for Tmem267:

(View these features in JBrowse)

Transcription Start Site	Location	Distance from Gene 5'-end
Tssr121266	Chr13:119624616-119624629 (+)	1 bp
Tssr121267	Chr13:119624652-119624660 (+)	34 bp
Tssr121268	Chr13:119624961-119625014 (+)	366 bp
Tssr121269	Chr13:119625023-119625065 (+)	422 bp
Tssr121270	Chr13:119625197-119625272 (+)	613 bp
Tssr121271	Chr13:119625345-119625373 (+)	737 bp