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Phf11c
Gene Detail
Symbol

Name
ID
Phf11c
PHD finger protein 11C
MGI:3648476
Synonyms
Gm6907
Feature Type
protein coding gene
Genetic Map
Chromosome 14
31.48 cM
Detailed Genetic Map ± 1 cM


Mapping data(1)
Sequence Map
Chr14:59380833-59395381 bp, - strand
From VEGA annotation of GRCm38

  14549 bp   ±  kb flank

VEGA Genome Browser | Ensembl Genome Browser | UCSC Browser | NCBI Map Viewer


Mouse Genome Browser
Vertebrate
homology
HomoloGene:87807  Vertebrate Homology Class
1 human; 4 mouse; 1 rat; 1 chimpanzee; 1 cattle; 1 dog; 1 chicken

Gene Tree: Phf11c

Human
homologs
Human Homolog PHF11, PHD finger protein 11
NCBI Gene ID 51131
neXtProt AC  NX_Q9UIL8
Human Synonyms  APY, BCAP, IGEL, IGER, IGHER, NYREN34, NY-REN-34
Human Chr (Location)  13q14.2; chr13:49495610-49528987 (+)  GRCh38
Disease Associations  (2) Diseases Associated with Human PHF11
Mutations,
alleles, and
phenotypes
Incidental mutations (data from APF )
Interactions
Phf11c interacts with 65 markers (Mir7-1, Mir7-2, Mir7b, ...)
Gene Ontology
(GO)
classifications
All GO classifications: (3 annotations)
Process biological_process
Component cellular_component
Function metal ion binding
Expression
cDNA source data(2)
External Resources: GEO   Expression Atlas
Molecular
reagents
All nucleic(2) cDNA(2)
Microarray probesets(1)
Other database
links
VEGA Gene ModelOTTMUSG00000043572 (Evidence)
Ensembl Gene ModelENSMUSG00000091144 (Evidence)
Entrez Gene628705 (Evidence)
UniGene479244
Consensus CDS ProjectCCDS49512.1
International Mouse Knockout Project StatusPhf11c
Sequences
Representative SequencesLengthStrain/SpeciesFlank
genomic OTTMUSG00000043572 VEGA Gene Model | MGI Sequence Detail 14549 C57BL/6J ±  kb
transcript OTTMUST00000114391 VEGA | MGI Sequence Detail 3459 Not Applicable 
polypeptide OTTMUSP00000063842 VEGA | MGI Sequence Detail 339 Not Applicable 

For the selected sequences
All sequences(20) RefSeq(11) UniProt(1)
Polymorphisms
SNPs within 2kb(39 from dbSNP Build 137)    SNPs within 2kb including multiple locations(41)
Protein-related
information
ResourceIDDescription
InterPro IPR011011 Zinc finger, FYVE/PHD-type
InterPro IPR001965 Zinc finger, PHD-type
InterPro IPR013083 Zinc finger, RING/FYVE/PHD-type
References
(Earliest) J:23000 MGD Nomenclature Committee, 2/14/1995;
(Latest) J:57747 MGI Genome Annotation Group and UniGene Staff, MGI-UniGene Interconnection Effort. Database Download. 2014;
All references(11)

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
Citing These Resources
Funding Information
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last database update
10/08/2014
MGI 5.20
The Jackson Laboratory