Gm8525 Pseudogene Detail

Summary

• Symbol
  Gm8525
• Name
  predicted gene 8525

• Feature Type
  pseudogene
• IDs
  MGI:3648451
  NCBI Gene: 667227
• Alliance
  gene page

Location &
Maps

• Sequence Map
  ChrY:3948853-3949713 bp, - strand

  From NCBI annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome Y, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  11 from dbSNP Build 142
• Strain Annotations
  17

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_3648451	pseudogene	ChrY:3948853-3949713 (-)
129S1/SvImJ	MGP_129S1SvImJ_G0013698	pseudogene	Chr6:128462001-128468595 (+)
A/J	MGP_AJ_G0010501	pseudogene	Chr10:31130726-31131537 (-)
AKR/J	MGP_AKRJ_G0013646	pseudogene	Chr6:126992568-126998036 (+)
BALB/cJ	MGP_BALBcJ_G0013663	pseudogene	Chr6:123212731-123218199 (+)
C3H/HeJ	MGP_C3HHeJ_G0013507	pseudogene	Chr6:127054113-127059581 (+)
C57BL/6NJ	MGP_C57BL6NJ_G0014049	pseudogene	Chr6:131839997-131845953 (+)
CAROLI/EiJ	no annotation
CAST/EiJ	MGP_CASTEiJ_G0013195	pseudogene	Chr6:127261600-127267033 (+)
CBA/J	MGP_CBAJ_G0013478	pseudogene	Chr6:136901008-136906476 (+)
DBA/2J	MGP_DBA2J_G0013558	pseudogene	Chr6:122547797-122553264 (+)
FVB/NJ	MGP_FVBNJ_G0013557	pseudogene	Chr6:121457088-121462556 (+)
LP/J	MGP_LPJ_G0013639	pseudogene	Chr6:128627997-128633465 (+)
NOD/ShiLtJ	MGP_NODShiLtJ_G0013571	pseudogene	Chr6:140935048-140940516 (+)
NZO/HlLtJ	MGP_NZOHlLtJ_G0014044	pseudogene	Chr6:126894415-126899873 (+)
PWK/PhJ	MGP_PWKPhJ_G0013000	pseudogene	Chr6:120790580-120796108 (+)
SPRET/EiJ	MGP_SPRETEiJ_G0012779	pseudogene	Chr6:124969969-124975431 (+)
WSB/EiJ	MGP_WSBEiJ_G0013250	pseudogene	Chr6:127259425-127266294 (+)

Homology

• Gene Tree
  Gm8525
  

Expression

• Assay Results
  706

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  21
• RefSeq
  1

• Ensembl
  ENSMUSG00000100656 (Evidence)
• NCBI Gene
  667227

Representative Sequences			Length	Strain/Species
genomic	667227	NCBI Gene Model | MGI Sequence Detail	861	C57BL/6J

References

• Summaries
  All 4
• Earliest
  J:23000 MGD Nomenclature Committee, Nomenclature Committee Use. 1995-02-14;
• Latest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;