About   Help   FAQ
Gm16401 Gene Detail
Summary
  • Symbol
    Gm16401
  • Name
    predicted gene 16401
Location &
Maps
more
  • Sequence Map
    Chr5:44100442-44102515 bp, + strand
  • From Ensembl annotation of GRCm38

    View this region in JBrowse

  • Genome Browsers
  • Genetic Map
    Chromosome 5, 24.14 cM
  • Mapping Data
    1 experiment
Strain
Comparison
more
  • SNPs within 2kb
    51 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_3648398
lncRNA gene Chr5:44100442-44102515 (+)
129S1/SvImJ MGP_129S1SvImJ_G0004072
antisense lncRNA gene Chr5:42746513-42748586 (+)
A/J MGP_AJ_G0004053
antisense lncRNA gene Chr5:41274583-41276656 (+)
AKR/J MGP_AKRJ_G0004031
antisense lncRNA gene Chr5:42730409-42732482 (+)
BALB/cJ MGP_BALBcJ_G0004039
antisense lncRNA gene Chr5:41743693-41745767 (+)
C3H/HeJ MGP_C3HHeJ_G0003985
antisense lncRNA gene Chr5:42714203-42716276 (+)
C57BL/6NJ MGP_C57BL6NJ_G0004188
antisense lncRNA gene Chr5:44805461-44807534 (+)
CAROLI/EiJ MGP_CAROLIEiJ_G0003666
antisense lncRNA gene Chr5:38494133-38496211 (+)
CAST/EiJ MGP_CASTEiJ_G0003949
antisense lncRNA gene Chr5:41830695-41832769 (+)
CBA/J MGP_CBAJ_G0003979
antisense lncRNA gene Chr5:45987505-45989578 (+)
DBA/2J MGP_DBA2J_G0003994
antisense lncRNA gene Chr5:41361486-41363559 (+)
FVB/NJ MGP_FVBNJ_G0004013
antisense lncRNA gene Chr5:40787822-40789895 (+)
LP/J MGP_LPJ_G0004074
antisense lncRNA gene Chr5:43211812-43213885 (+)
NOD/ShiLtJ MGP_NODShiLtJ_G0004002
antisense lncRNA gene Chr5:46795651-46797724 (+)
NZO/HlLtJ MGP_NZOHlLtJ_G0004183
antisense lncRNA gene Chr5:42223547-42225621 (+)
PWK/PhJ MGP_PWKPhJ_G0003902
antisense lncRNA gene Chr5:40494173-40496246 (+)
SPRET/EiJ MGP_SPRETEiJ_G0003847
antisense lncRNA gene Chr5:41654043-41656116 (+)
WSB/EiJ MGP_WSBEiJ_G0003984
antisense lncRNA gene Chr5:42313795-42315868 (+)



Homology
less
Human Diseases
less
  • References
    1 with disease annotations
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    18 phenotype references
  • All Mutations and Alleles
    6
  • Chemically induced (ENU)
    1
  • Chemically induced (other)
    2
  • Radiation induced
    2
  • Spontaneous
    1
  • Genomic Mutations
    6 involving Gm16401
  • Find Mice (IMSR)
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
  • cDNA Data
Interactions
less
Sequences &
Gene Models
less
  • All Sequences
  • RefSeq
  • UniProt
Representative SequencesLengthStrain/SpeciesFlank
genomic ENSMUSG00000072962 Ensembl Gene Model | MGI Sequence Detail 2074 C57BL/6J ±  kb
transcript ENSMUST00000197463 Ensembl | MGI Sequence Detail 2074 Not Applicable  
polypeptide Q3URN1 UniProt | EBI | MGI Sequence Detail 153 Not Applicable  
For the selected sequence
Protein
Information
less
  • UniProt
    1 Sequence
Molecular
Reagents
less
  • All nucleic 1
    cDNA 1

    Microarray probesets 1
References
more
  • Summaries
    All 25
    Diseases 1
    Phenotypes 18
  • Earliest
    J:5021 Batchelor AL, et al., A comparison of the mutagenic effectiveness of chronic neutron- and gamma-irradiation of mouse spermatogonia. Mutat Res. 1966 Jun;3(3):218-29
  • Latest
    J:125425 Howell GR, et al., Mutation of a ubiquitously expressed mouse transmembrane protein (Tapt1) causes specific skeletal homeotic transformations. Genetics. 2007 Feb;175(2):699-707

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB), Gene Ontology (GO)
Citing These Resources
Funding Information
Warranty Disclaimer & Copyright Notice
Send questions and comments to User Support.
last database update
10/20/2020
MGI 6.16
The Jackson Laboratory