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Gm6471 Gene Detail
Summary
  • Symbol
    Gm6471
  • Name
    predicted gene 6471
  • Feature Type
    lncRNA gene
  • IDs
    MGI:3648397
    NCBI Gene: 624121
  • Alliance
    gene page
Location &
Maps
more
  • Sequence Map
    Chr7:142384993-142406007 bp, + strand
    From NCBI annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
    Ensembl | UCSC | NCBI
  • Genetic Map
    Chromosome 7, 88.04 cM
  • Mapping Data
    1 experiment
Strain
Comparison
more
  • SNPs within 2kb
    160 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_3648397
 lncRNA gene Chr7:142368989-142406007 (+)
129S1/SvImJ MGP_129S1SvImJ_G0033264
 protein coding gene Chr7:148103265-148121259 (+)
A/J MGP_AJ_G0033247
 protein coding gene Chr7:143811156-143826080 (+)
AKR/J MGP_AKRJ_G0033178
 protein coding gene Chr7:147857303-147873116 (+)
BALB/cJ MGP_BALBcJ_G0033247
 protein coding gene Chr7:143591717-143607302 (+)
C3H/HeJ MGP_C3HHeJ_G0032963
 protein coding gene Chr7:147620426-147641179 (+)
C57BL/6NJ MGP_C57BL6NJ_G0033757
 protein coding gene Chr7:153459968-153478416 (+)
CAROLI/EiJ MGP_CAROLIEiJ_G0030730
 protein coding gene Chr7:145030815-145048122 (+)
CAST/EiJ MGP_CASTEiJ_G0032285
 protein coding gene Chr7:139920246-139935941 (+)
CBA/J MGP_CBAJ_G0032934
 protein coding gene Chr7:158713438-158733847 (+)
DBA/2J MGP_DBA2J_G0033088
 protein coding gene Chr7:141787746-141807532 (+)
FVB/NJ MGP_FVBNJ_G0033036
 protein coding gene Chr7:141713248-141727627 (+)
LP/J MGP_LPJ_G0033180
 protein coding gene Chr7:149619887-149638223 (+)
NOD/ShiLtJ MGP_NODShiLtJ_G0033070
 protein coding gene Chr7:159315009-159333090 (+)
NZO/HlLtJ MGP_NZOHlLtJ_G0033777
 protein coding gene Chr7:146816221-146831941 (+)
PWK/PhJ MGP_PWKPhJ_G0031994
 protein coding gene Chr7:135094065-135108265 (+)
SPRET/EiJ MGP_SPRETEiJ_G0031840
 protein coding gene Chr7:133601419-133628438 (+)
WSB/EiJ MGP_WSBEiJ_G0032397
 protein coding gene Chr7:147806596-147834885 (+)



Homology
less
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    6 phenotype references
Gene Ontology
(GO)
Classifications
less
Molecular Function

No experimental evidence to support Molecular Function annotation, following literature review. See J:73796.
Biological Process

No experimental evidence to support Biological Process annotation, following literature review. See J:73796.
Cellular Component

No experimental evidence to support Cellular Component annotation, following literature review. See J:73796.
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
    707
  • Tissues
    1
  • cDNA Data
    3
  • Literature Summary
    1
Sequences &
Gene Models
less
  • All Sequences
    26
  • RefSeq
    2
  • UniProt
    1
Representative SequencesLengthStrain/SpeciesFlank
genomic 624121 NCBI Gene Model | MGI Sequence Detail 21015 C57BL/6J ±  kb
transcript AK139090 GenBank | ENA | DDBJ | MGI Sequence Detail 806 C57BL/6J  
polypeptide Q3UTU4 UniProt | EBI | MGI Sequence Detail 125 Not Applicable  
For the selected sequence
Protein
Information
less
  • UniProt
    1 Sequence
Molecular
Reagents
less
  • All nucleic 4
    cDNA 3
    Primer pair 1

    Microarray probesets 1
References
more
  • Summaries
    All 15
    Developmental Gene Expression 1
    Phenotypes 6
  • Earliest
    J:153719 Lefebvre L, et al., The interval between Ins2 and Ascl2 is dispensable for imprinting centre function in the murine Beckwith-Wiedemann region. Hum Mol Genet. 2009 Nov 15;18(22):4255-67
  • Latest
    J:266304 Bogutz AB, et al., Transcription factor ASCL2 is required for development of the glycogen trophoblast cell lineage. PLoS Genet. 2018 Aug;14(8):e1007587
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
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Send questions and comments to User Support. 		last database update
04/16/2024
MGI 6.23 		The Jackson Laboratory