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Gm6471 Gene Detail
Summary
  • Symbol
    Gm6471
  • Name
    predicted gene 6471
  • Feature Type
    lncRNA gene
  • IDs
    MGI:3648397
    NCBI Gene: 624121
  • Alliance
Location &
Maps
more
  • Sequence Map
    Chr7:142831256-142852270 bp, + strand
  • From NCBI annotation of GRCm38

    View this region in JBrowse

  • Genome Browsers
  • Genetic Map
    Chromosome 7, 88.04 cM
  • Mapping Data
    1 experiment
Strain
Comparison
more
  • SNPs within 2kb
    160 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_3648397
lncRNA gene Chr7:142815252-142852270 (+)
129S1/SvImJ MGP_129S1SvImJ_G0033264
protein coding gene Chr7:148103265-148121259 (+)
A/J MGP_AJ_G0033247
protein coding gene Chr7:143811156-143826080 (+)
AKR/J MGP_AKRJ_G0033178
protein coding gene Chr7:147857303-147873116 (+)
BALB/cJ MGP_BALBcJ_G0033247
protein coding gene Chr7:143591717-143607302 (+)
C3H/HeJ MGP_C3HHeJ_G0032963
protein coding gene Chr7:147620426-147641179 (+)
C57BL/6NJ MGP_C57BL6NJ_G0033757
protein coding gene Chr7:153459968-153478416 (+)
CAROLI/EiJ MGP_CAROLIEiJ_G0030730
protein coding gene Chr7:145030815-145048122 (+)
CAST/EiJ MGP_CASTEiJ_G0032285
protein coding gene Chr7:139920246-139935941 (+)
CBA/J MGP_CBAJ_G0032934
protein coding gene Chr7:158713438-158733847 (+)
DBA/2J MGP_DBA2J_G0033088
protein coding gene Chr7:141787746-141807532 (+)
FVB/NJ MGP_FVBNJ_G0033036
protein coding gene Chr7:141713248-141727627 (+)
LP/J MGP_LPJ_G0033180
protein coding gene Chr7:149619887-149638223 (+)
NOD/ShiLtJ MGP_NODShiLtJ_G0033070
protein coding gene Chr7:159315009-159333090 (+)
NZO/HlLtJ MGP_NZOHlLtJ_G0033777
protein coding gene Chr7:146816221-146831941 (+)
PWK/PhJ MGP_PWKPhJ_G0031994
protein coding gene Chr7:135094065-135108265 (+)
SPRET/EiJ MGP_SPRETEiJ_G0031840
protein coding gene Chr7:133601419-133628438 (+)
WSB/EiJ MGP_WSBEiJ_G0032397
protein coding gene Chr7:147806596-147834885 (+)



Homology
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Mutations,
Alleles, and
Phenotypes
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  • Phenotype Summary
    6 phenotype references
Expression
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Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
  • Tissues
  • cDNA Data
  • Literature Summary
Interactions
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Sequences &
Gene Models
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  • All Sequences
  • RefSeq
  • UniProt
  • UniGene
Representative SequencesLengthStrain/SpeciesFlank
genomic 624121 NCBI Gene Model | MGI Sequence Detail 21015 C57BL/6J ±  kb
transcript AK139090 GenBank | EMBL | DDBJ | MGI Sequence Detail 806 C57BL/6J  
polypeptide Q3UTU4 UniProt | EBI | MGI Sequence Detail 125 Not Applicable  
For the selected sequence
Protein
Information
less
  • UniProt
    1 Sequence
Molecular
Reagents
less
  • All nucleic 4
    cDNA 3
    Primer pair 1

    Microarray probesets 1
References
more
  • Summaries
    All 15
    Developmental Gene Expression 1
    Phenotypes 6
  • Earliest
    J:153719 Lefebvre L, et al., The interval between Ins2 and Ascl2 is dispensable for imprinting centre function in the murine Beckwith-Wiedemann region. Hum Mol Genet. 2009 Nov 15;18(22):4255-67
  • Latest
    J:266304 Bogutz AB, et al., Transcription factor ASCL2 is required for development of the glycogen trophoblast cell lineage. PLoS Genet. 2018 Aug;14(8):e1007587

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB), Gene Ontology (GO)
Citing These Resources
Funding Information
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last database update
07/29/2020
MGI 6.15
The Jackson Laboratory