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Gm5471 Pseudogene Detail
Summary
  • Symbol
    Gm5471
  • Name
    predicted pseudogene 5471
Location &
Maps
more
  • Sequence Map
    Chr15:44835193-44835529 bp, - strand
    From Ensembl annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
    Ensembl | UCSC | NCBI
  • Genetic Map
    Chromosome 15, 17.13 cM
  • Mapping Data
    1 experiment
Strain
Comparison
more
  • SNPs within 2kb
    17 from dbSNP Build 142
  • Strain Annotations
    16
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_3648310
 pseudogene Chr15:44835018-44835569 (-)
129S1/SvImJ no annotation
A/J MGP_AJ_G0011173
 pseudogene Chr15:41943890-41944231 (-)
AKR/J MGP_AKRJ_G0011133
 pseudogene Chr15:43178272-43178612 (-)
BALB/cJ MGP_BALBcJ_G0011140
 pseudogene Chr15:42016884-42017225 (-)
C3H/HeJ MGP_C3HHeJ_G0011040
 pseudogene Chr15:43097020-43097354 (-)
C57BL/6NJ MGP_C57BL6NJ_G0011438
 pseudogene Chr15:45293895-45294236 (-)
CAROLI/EiJ MGP_CAROLIEiJ_G0009957
 pseudogene Chr14:51350287-51350601 (+)
CAST/EiJ MGP_CASTEiJ_G0010863
 pseudogene Chr15:43598485-43598826 (-)
CBA/J MGP_CBAJ_G0011020
 pseudogene Chr15:46835597-46835932 (-)
DBA/2J MGP_DBA2J_G0011068
 pseudogene Chr15:41744778-41745119 (-)
FVB/NJ MGP_FVBNJ_G0011068
 pseudogene Chr15:41042843-41043184 (-)
LP/J MGP_LPJ_G0011159
 pseudogene Chr15:43359057-43359614 (-)
NOD/ShiLtJ MGP_NODShiLtJ_G0011062
 pseudogene Chr15:50266796-50267137 (-)
NZO/HlLtJ MGP_NZOHlLtJ_G0011413
 pseudogene Chr15:43376143-43376484 (-)
PWK/PhJ MGP_PWKPhJ_G0010679
 pseudogene Chr14:49639299-49639644 (+)
SPRET/EiJ MGP_SPRETEiJ_G0010502
 pseudogene Chr14:50328938-50329279 (+)
WSB/EiJ no annotation



Homology
less
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    5 phenotype references
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
    706
Sequences &
Gene Models
less
  • All Sequences
    21
  • RefSeq
    2
Representative SequencesLengthStrain/SpeciesFlank
genomic ENSMUSG00000058463 Ensembl Gene Model | MGI Sequence Detail 337 C57BL/6J ±  kb
transcript ENSMUST00000072732 Ensembl | MGI Sequence Detail 337 Not Applicable  
polypeptide XP_036015556 RefSeq | MGI Sequence Detail 113 C57BL/6J  
For the selected sequence
Molecular
Reagents
less

  • Microarray probesets 1
References
more
  • Summaries
    All 10
    Phenotypes 5
  • Earliest
    J:109968 Roderick TH, et al., Nineteen paracentric chromosomal inversions in mice. Genetics. 1974 Jan;76(1):109-17
  • Latest
    J:137335 Roderick TH, Chromosomal inversions in studies of mammalian mutagenesis. Genetics. 1979 May;92(1 Pt 1 Suppl):s121-6
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
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Send questions and comments to User Support. 		last database update
04/09/2024
MGI 6.23 		The Jackson Laboratory