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Gm7854 Gene Detail
Summary
  • Symbol
    Gm7854
  • Name
    predicted gene 7854
  • Synonyms
    ENSMUSG00000054483
  • Feature Type
    antisense lncRNA gene
  • IDs
    MGI:3648234
    NCBI Gene: 665934
  • Alliance
Location &
Maps
more
  • Sequence Map
    Chr5:43151686-43235354 bp, - strand
  • From NCBI annotation of GRCm38

    View this region in JBrowse

  • Genome Browsers
  • Genetic Map
    Chromosome 5, 23.65 cM
  • Mapping Data
    2 experiments
Strain
Comparison
more
  • SNPs within 2kb
    387 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_3648234
antisense lncRNA gene Chr5:43151686-43235355 (-)
129S1/SvImJ MGP_129S1SvImJ_G0004069
antisense lncRNA gene Chr5:41761067-41843943 (-)
A/J MGP_AJ_G0004050
antisense lncRNA gene Chr5:40336663-40413210 (-)
AKR/J MGP_AKRJ_G0004028
antisense lncRNA gene Chr5:41770921-41853394 (-)
BALB/cJ MGP_BALBcJ_G0004036
antisense lncRNA gene Chr5:40806624-40883347 (-)
C3H/HeJ MGP_C3HHeJ_G0003982
antisense lncRNA gene Chr5:41739300-41827956 (-)
C57BL/6NJ MGP_C57BL6NJ_G0004185
antisense lncRNA gene Chr5:43806877-43890408 (-)
CAROLI/EiJ MGP_CAROLIEiJ_G0003664
antisense lncRNA gene Chr5:37601781-37677077 (-)
CAST/EiJ MGP_CASTEiJ_G0003946
antisense lncRNA gene Chr5:40852032-40932621 (-)
CBA/J MGP_CBAJ_G0003976
antisense lncRNA gene Chr5:44940532-45026368 (-)
DBA/2J MGP_DBA2J_G0003991
antisense lncRNA gene Chr5:40436745-40512289 (-)
FVB/NJ MGP_FVBNJ_G0004010
antisense lncRNA gene Chr5:39849345-39925115 (-)
LP/J MGP_LPJ_G0004071
antisense lncRNA gene Chr5:42208695-42293210 (-)
NOD/ShiLtJ MGP_NODShiLtJ_G0003999
antisense lncRNA gene Chr5:45751614-45847138 (-)
NZO/HlLtJ MGP_NZOHlLtJ_G0004180
antisense lncRNA gene Chr5:41269027-41348137 (-)
PWK/PhJ MGP_PWKPhJ_G0003899
antisense lncRNA gene Chr5:39562071-39639313 (-)
SPRET/EiJ MGP_SPRETEiJ_G0003844
antisense lncRNA gene Chr5:40715875-40789878 (-)
WSB/EiJ MGP_WSBEiJ_G0003981
antisense lncRNA gene Chr5:41342761-41420939 (-)



Homology
less
Human Diseases
less
  • References
    1 with disease annotations
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    20 phenotype references
  • All Mutations and Alleles
    7
  • Chemically induced (ENU)
    1
  • Chemically induced (other)
    2
  • Gene trapped
    1
  • Radiation induced
    2
  • Spontaneous
    1
  • Genomic Mutations
    6 involving Gm7854
  • Find Mice (IMSR)
Expression
less
  • cDNA Data
Sequences &
Gene Models
less
  • All Sequences
  • RefSeq
  • UniProt
  • UniGene
Representative SequencesLengthStrain/SpeciesFlank
genomic 665934 NCBI Gene Model | MGI Sequence Detail 83669 C57BL/6J ±  kb
transcript NR_028417 RefSeq | MGI Sequence Detail 1432 C57BL/6  
polypeptide Q8C9M3 UniProt | EBI | MGI Sequence Detail 117 Not Applicable  
For the selected sequence
Protein
Information
less
  • UniProt
    1 Sequence
Molecular
Reagents
less
  • All nucleic 4
    cDNA 4

    Microarray probesets 2
Other
Accession IDs
less
MGI:3642844
References
more
  • Summaries
    All 31
    Diseases 1
    Phenotypes 20
  • Earliest
    J:5021 Batchelor AL, et al., A comparison of the mutagenic effectiveness of chronic neutron- and gamma-irradiation of mouse spermatogonia. Mutat Res. 1966 Jun;3(3):218-29
  • Latest
    J:142754 Hansen GM, et al., Large-scale gene trapping in C57BL/6N mouse embryonic stem cells. Genome Res. 2008 Oct;18(10):1670-9

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
Citing These Resources
Funding Information
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last database update
12/04/2018
MGI 6.13
The Jackson Laboratory