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Gm5544 Gene Detail
Summary
  • Symbol
    Gm5544
  • Name
    predicted gene 5544
Location &
Maps
more
  • Sequence Map
    Chr3:97930173-97967018 bp, + strand
  • From NCBI annotation of GRCm38

    View this region in JBrowse

  • Genome Browsers
  • Genetic Map
    Chromosome 3, 42.36 cM
  • Mapping Data
    1 experiment
Strain
Comparison
more
  • SNPs within 2kb
    262 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_3648209
lncRNA gene Chr3:97930173-97967018 (+)
129S1/SvImJ MGP_129S1SvImJ_G0006252
lincRNA gene Chr3:98903927-98945006 (+)
A/J MGP_AJ_G0006245
lincRNA gene Chr3:95732732-95770506 (+)
AKR/J MGP_AKRJ_G0006221
lincRNA gene Chr3:98026062-98065541 (+)
BALB/cJ MGP_BALBcJ_G0006219
lincRNA gene Chr3:95536360-95575149 (+)
C3H/HeJ MGP_C3HHeJ_G0006171
lincRNA gene Chr3:98296751-98333349 (+)
C57BL/6NJ MGP_C57BL6NJ_G0006384
lincRNA gene Chr3:102575819-102617528 (+)
CAROLI/EiJ MGP_CAROLIEiJ_G0005683
lincRNA gene Chr3:91991305-92027893 (+)
CAST/EiJ MGP_CASTEiJ_G0006105
lincRNA gene Chr3:97593416-97631807 (+)
CBA/J MGP_CBAJ_G0006155
lincRNA gene Chr3:106229222-106275842 (+)
DBA/2J MGP_DBA2J_G0006176
lincRNA gene Chr3:95045763-95082956 (+)
FVB/NJ MGP_FVBNJ_G0006197
lincRNA gene Chr3:93038085-93075840 (+)
LP/J MGP_LPJ_G0006257
lincRNA gene Chr3:100161283-100202145 (+)
NOD/ShiLtJ MGP_NODShiLtJ_G0006188
lincRNA gene Chr3:112311212-112352698 (+)
NZO/HlLtJ MGP_NZOHlLtJ_G0006390
lincRNA gene Chr3:97651352-97691770 (+)
PWK/PhJ MGP_PWKPhJ_G0006045
lincRNA gene Chr3:94934439-94975937 (+)
SPRET/EiJ MGP_SPRETEiJ_G0005956
lincRNA gene Chr3:95932510-95969336 (+)
WSB/EiJ MGP_WSBEiJ_G0006152
lincRNA gene Chr3:98090432-98128446 (+)



Homology
less
Human Diseases
less
  • References
    1 with disease annotations
Mutations,
Alleles, and
Phenotypes
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  • Phenotype Summary
    18 phenotypes from 1 allele in 1 genetic background
    9 phenotype references
Phenotype Overview

adipose tissue
behavior/neurological
cardiovascular system
cellular
craniofacial
digestive/alimentary system
embryo
endocrine/exocrine glands
growth/size/body
hearing/vestibular/ear
hematopoietic system
homeostasis/metabolism
immune system
integument
limbs/digits/tail
liver/biliary system
mortality/aging
muscle
neoplasm
nervous system
pigmentation
renal/urinary system
reproductive system
respiratory system
skeleton
taste/olfaction
vision/eye

Click cells to view annotations.
  • All Mutations and Alleles
    5
  • Chemically induced (other)
    1
  • Radiation induced
    1
  • Targeted
    3
  • Genomic Mutations
    2 involving Gm5544
  • Find Mice (IMSR)
Expression
less
  • cDNA Data
Interactions
less
Sequences &
Gene Models
less
  • All Sequences
  • RefSeq
  • UniProt
  • UniGene
Representative SequencesLengthStrain/SpeciesFlank
genomic 433632 NCBI Gene Model | MGI Sequence Detail 36846 C57BL/6J ±  kb
transcript NM_001033779 RefSeq | MGI Sequence Detail 891 C57BL/6  
polypeptide NP_001028951 RefSeq | MGI Sequence Detail 123 C57BL/6  
For the selected sequence
Protein
Information
less
  • UniProt
    1 Sequence
Molecular
Reagents
less
  • All nucleic 6
    cDNA 6

    Microarray probesets 2
References
more
  • Summaries
    All 21
    Diseases 1
    Phenotypes 9
  • Earliest
    J:70677 Cook SA, et al., Mouse paracentric inversion In(3)55Rk mutates the urate oxidase gene. Cytogenet Cell Genet. 2001;93(1-2):77-82
  • Latest
    J:261316 Perez-Garcia V, et al., Placentation defects are highly prevalent in embryonic lethal mouse mutants. Nature. 2018 Mar 22;555(7697):463-468

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB), Gene Ontology (GO)
Citing These Resources
Funding Information
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last database update
10/15/2019
MGI 6.14
The Jackson Laboratory