About   Help   FAQ
Tmem240 Gene Detail
Summary
  • Symbol
    Tmem240
  • Name
    transmembrane protein 240
  • Synonyms
    Gm5151
  • Feature Type
    protein coding gene
  • IDs
    MGI:3648074
    NCBI Gene: 381582
  • Alliance
  • Transcription Start Sites
    1 TSS
Location &
Maps
more
  • Sequence Map
    Chr4:155734804-155740564 bp, + strand
  • From NCBI annotation of GRCm38

    View this region in JBrowse

  • Genome Browsers
  • Genetic Map
    Chromosome 4, 87.18 cM
  • Mapping Data
    1 experiment
Strain
Comparison
more
  • SNPs within 2kb
    17 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_3648074
protein coding gene Chr4:155734800-155740564 (+)
129S1/SvImJ MGP_129S1SvImJ_G0029224
protein coding gene Chr4:160089816-160095606 (+)
A/J MGP_AJ_G0029189
protein coding gene Chr4:153353131-153358919 (+)
AKR/J MGP_AKRJ_G0029137
protein coding gene Chr4:157519232-157525020 (+)
BALB/cJ MGP_BALBcJ_G0029205
protein coding gene Chr4:153824826-153830909 (+)
C3H/HeJ MGP_C3HHeJ_G0028926
protein coding gene Chr4:158067485-158073293 (+)
C57BL/6NJ MGP_C57BL6NJ_G0029654
protein coding gene Chr4:165772847-165778629 (+)
CAROLI/EiJ MGP_CAROLIEiJ_G0026899
protein coding gene Chr4:145639543-145645316 (+)
CAST/EiJ MGP_CASTEiJ_G0028338
protein coding gene Chr4:155526837-155532624 (+)
CBA/J MGP_CBAJ_G0028888
protein coding gene Chr4:170779799-170785587 (+)
DBA/2J MGP_DBA2J_G0029037
protein coding gene Chr4:153373026-153378845 (+)
FVB/NJ MGP_FVBNJ_G0029000
protein coding gene Chr4:152618325-152624610 (+)
LP/J MGP_LPJ_G0029127
protein coding gene Chr4:160002841-160008605 (+)
NOD/ShiLtJ MGP_NODShiLtJ_G0029027
protein coding gene Chr4:173589630-173595418 (+)
NZO/HlLtJ MGP_NZOHlLtJ_G0029686
protein coding gene Chr4:158152150-158157991 (+)
PWK/PhJ MGP_PWKPhJ_G0028059
protein coding gene Chr4:149511904-149517740 (+)
SPRET/EiJ MGP_SPRETEiJ_G0027893
protein coding gene Chr4:152404458-152410222 (+)
WSB/EiJ MGP_WSBEiJ_G0028418
protein coding gene Chr4:158318155-158323838 (+)



Homology
more
  • Human Ortholog
    TMEM240, transmembrane protein 240
  • Vertebrate Orthologs
    8
  • Human Ortholog
    TMEM240, transmembrane protein 240
    Orthology source: HomoloGene, HGNC
  • Synonyms
    C1orf70, SCA21
  • Links
    NCBI Gene ID: 339453
    neXtProt AC: NX_Q5SV17
    UniProt: Q5SV17

  • Chr Location
    1p36.33; chr1:1534778-1540360 (-)  GRCh38.p7

Human Diseases
more
  • Diseases
    1 with human TMEM240 associations

Human Disease Mouse Models
      
IDs
Click on a disease name to see all genes associated with that disease.

Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    3 phenotype references
Gene Ontology
(GO)
Classifications
less
  • All GO Annotations
  • GO References
Molecular Function

carbohydrate derivative binding
cytoskeletal protein binding
DNA binding
enzyme regulator
hydrolase
ligase
lipid binding
oxidoreductase
RNA binding
signaling receptor activity
signaling receptor binding
transcription
transferase
transporter
Biological Process

carbohydrate derivative metabolism
cell death
cell differentiation
cell population proliferation
cellular component organization
establishment of localization
homeostatic process
immune system process
lipid metabolic process
nucleic acid-templated transcription
protein metabolic process
response to stimulus
signaling
system development
Cellular Component

cell projection
cytoplasmic vesicle
cytoskeleton
cytosol
endoplasmic reticulum
endosome
extracellular region
Golgi apparatus
mitochondrion
non-membrane-bounded organelle
nucleus
organelle envelope
organelle lumen
plasma membrane
synapse
vacuole
Click cells to view annotations.
Expression
less
  • cDNA Data
Interactions
less
Sequences &
Gene Models
less
Representative SequencesLengthStrain/SpeciesFlank
genomic 381582 NCBI Gene Model | MGI Sequence Detail 5761 C57BL/6J ±  kb
transcript NM_001101506 RefSeq | MGI Sequence Detail 1378 C57BL/6  
polypeptide B2RWJ3 UniProt | EBI | MGI Sequence Detail 173 Not Applicable  
For the selected sequence
Protein
Information
less
Molecular
Reagents
less
  • All nucleic 5
    cDNA 5
References
more
  • Summaries
    All 17
    Gene Ontology 3
    Phenotypes 3
  • Earliest
    J:153498 Diez-Roux G, et al., A high-resolution anatomical atlas of the transcriptome in the mouse embryo. PLoS Biol. 2011;9(1):e1000582
  • Latest
    J:217272 Trinidad JC, et al., Global identification and characterization of both O-GlcNAcylation and phosphorylation at the murine synapse. Mol Cell Proteomics. 2012 Aug;11(8):215-29

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB), Gene Ontology (GO)
Citing These Resources
Funding Information
Warranty Disclaimer & Copyright Notice
Send questions and comments to User Support.
last database update
02/18/2020
MGI 6.14
The Jackson Laboratory